RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 IMPDH1P20839 514 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MAGP20916 626 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CD40LGP29965 261 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 OR1E1P30953 314 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 DUSP4Q13115 394 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MED22Q15528 200 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 HKDC1Q2TB90 917 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TIGD2Q4W5G0 525 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 HSD17B12Q53GQ0 312 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 PLEKHG4Q58EX7 1191 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CES3Q6UWW8 571 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 OR52K1Q8NGK4 314 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 NRG4Q8WWG1 115 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 NELL1Q92832 810 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ASIC4Q96FT7 647 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ITCHQ96J02 903 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TPD52L3Q96J77 140 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 PHOX2BQ99453 314 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CINPQ9BW66 212 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 APOL5Q9BWW9 433 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CXCL16Q9H2A7 254 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 RERGLQ9H628 205 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 RETREG1Q9H6L5 497 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 USP29Q9HBJ7 922 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SH3BP4Q9P0V3 963 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ACTR3BQ9P1U1 418 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ANKMY1Q9P2S6 941 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SLC27A5Q9Y2P5 690 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MRPS23Q9Y3D9 190 aaKnown RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CEPT1Q9Y6K0 416 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 INPPL1O15357 1258 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MAGEB3O15480 346 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SEC22BO75396 215 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 FAM155BO75949 473 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TMEM63AO94886 807 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TCF3P15923 654 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 IL32P24001 234 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 OR1D2P34982 312 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SLC11A1P49279 550 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ATP4BP51164 291 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 POU6F1Q14863 301 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 PARP15Q460N3 678 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 LIN54Q6MZP7 749 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SLC2A7Q6PXP3 512 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 GLIS1Q8NBF1 620 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 LPCAT1Q8NF37 534 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 OR10T2Q8NGX3 314 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SCAMP5Q8TAC9 235 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 OVCA2Q8WZ82 227 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SLC45A3Q96JT2 553 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 VPS35Q96QK1 796 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 PAAF1Q9BRP4 392 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CHCHD6Q9BRQ6 235 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TMEM246Q9BRR3 403 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TBCDQ9BTW9 1192 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 SLITRK2Q9H156 845 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MUC3BQ9H195 1237 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ANKRA2Q9H9E1 313 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 STOX2Q9P2F5 926 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MAN2B2Q9Y2E5 1009 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 KRBA1A5PL33 1030 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 FAM149AA5PLN7 773 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 H0Y858 1186 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 KMOO15229 486 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 AP1G1O43747 822 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 DFNA5O60443 496 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 OR7A10O76100 309 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 RHOCP08134 193 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ZNF182P17025 639 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CES1P23141 567 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MYF6P23409 242 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MYL9P24844 172 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 PTPN3P26045 913 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MAPKAPK2P49137 400 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ALDH3A2P51648 485 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 POLR2JP52435 117 aaKnown RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 DSC1Q08554 894 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 NFATC3Q12968 1075 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 DNASE1L3Q13609 305 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ATP13A5Q4VNC0 1218 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CLLU1OSQ5K130 101 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TMEM214Q6NUQ4 689 aaKnown RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ZC3H7AQ8IWR0 971 aaKnown RBP6.1□□□□□ -1.43
VPS13D-202ENST00000460333 LGI2Q8N0V4 545 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ZNF567Q8N184 647 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 TBC1D19Q8N5T2 526 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 DPP10Q8N608 796 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CHPT1Q8WUD6 406 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 DHRS1Q96LJ7 313 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 C1orf74Q96LT6 269 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 FRMD6Q96NE9 622 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ACOX2Q99424 681 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MNTQ99583 582 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CCDC32Q9BV29 185 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 MND1Q9BWT6 205 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CEP41Q9BYV8 373 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 CRISPLD1Q9H336 500 aa6.1□□□□□ -1.43
VPS13D-202ENST00000460333 ARMC7Q9H6L4 198 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms