RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TMEM63AO94886 807 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 CYP2A7P20853 494 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 PRDX3P30048 256 aaKnown RBP20.91■□□□□ 0.94
CPNE1-220ENST00000458038 VAV2P52735 878 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 RPA4Q13156 261 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 C4orf17Q53FE4 359 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 SARM1Q6SZW1 724 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 DAAM2Q86T65 1068 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 CALR3Q96L12 384 aaKnown RBP20.91■□□□□ 0.94
CPNE1-220ENST00000458038 IP6K3Q96PC2 410 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 FERD3LQ96RJ6 166 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 C17orf62Q9BQA9 187 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 HEMGNQ9BXL5 484 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 PITPNM3Q9BZ71 974 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 ACTR5Q9H9F9 607 aaPredicted RBP20.91■□□□□ 0.94
CPNE1-220ENST00000458038 ARNT2Q9HBZ2 717 aa20.91■□□□□ 0.94
CPNE1-220ENST00000458038 CUEDC1Q9NWM3 386 aaPredicted RBP20.91■□□□□ 0.94
CPNE1-220ENST00000458038 CENPEQ02224 2701 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 CCDC66A2RUB6 948 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 GSAPA4D1B5 854 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 TMEM150CB9EJG8 249 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 ARCN1P48444 511 aaKnown RBP20.9■□□□□ 0.94
CPNE1-220ENST00000458038 CHAF1BQ13112 559 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 NADK2Q4G0N4 442 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 ANKRD20A2Q5SQ80 823 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 ANKRD20A1Q5TYW2 823 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 ANKRD20A3Q5VUR7 823 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 CDKL3Q8IVW4 592 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-220ENST00000458038 SYTL1Q8IYJ3 562 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 GLIS1Q8NBF1 620 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 GORASP1Q9BQQ3 440 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 SLC7A5P2Q9GIP4 190 aa20.9■□□□□ 0.94
CPNE1-220ENST00000458038 IGLV3-16A0A075B6K0 115 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 C2orf74A8MZ97 194 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 C9J4A7 227 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 LCA5LO95447 670 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 CD63P08962 238 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 AGXTP21549 392 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 GNLYP22749 145 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 ZNF140P52738 457 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-220ENST00000458038 ITGA1P56199 1179 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 ABRQ12979 859 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 MSLNQ13421 630 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-220ENST00000458038 FBXO38Q6PIJ6 1188 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 LILRA3Q8N6C8 439 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-220ENST00000458038 OR13C4Q8NGS5 318 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 OR1L3Q8NH93 324 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 PPM1MQ96MI6 270 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 DHRS4Q9BTZ2 278 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 OR52A5Q9H2C5 316 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 GOLPH3Q9H4A6 298 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 COG4Q9H9E3 785 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 PCMTD2Q9NV79 361 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 ZDHHC3Q9NYG2 299 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 PADI2Q9Y2J8 665 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 ANKRD12Q6UB98 2062 aa20.89■□□□□ 0.93
CPNE1-220ENST00000458038 E7EQ34 232 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 KLHL41O60662 606 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 CAPN1P07384 714 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 CTNNA2P26232 953 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 PSMB4P28070 264 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 CETN2P41208 172 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 UQCRFS1P47985 274 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 MARCKSL1P49006 195 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 TBX2Q13207 712 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-220ENST00000458038 SPA17Q15506 151 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 SKOR2Q2VWA4 1001 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-220ENST00000458038 ZNF789Q5FWF6 425 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 LCN10Q6JVE6 187 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 JMJD6Q6NYC1 403 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-220ENST00000458038 AMIGO1Q86WK6 493 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 RAB43Q86YS6 212 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 CCDC170Q8IYT3 715 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 GPR135Q8IZ08 494 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 ACTL9Q8TC94 416 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 SSC4DQ8WTU2 575 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.88■□□□□ 0.932e-6■■■■■ 26.8
CPNE1-220ENST00000458038 TRAPPC9Q96Q05 1148 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 APOL2Q9BQE5 337 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 SLC29A3Q9BZD2 475 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 SLAMF7Q9NQ25 335 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 C5AR2Q9P296 337 aa20.88■□□□□ 0.93
CPNE1-220ENST00000458038 TRBV5-4A0A0C4DH59 114 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 IGHEP01854 428 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 RBP3P10745 1247 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 ST6GAL1P15907 406 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 PTPN7P35236 360 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 OTUD4Q01804 1114 aaKnown RBP20.87■□□□□ 0.93
CPNE1-220ENST00000458038 NCF4Q15080 339 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 INPP5JQ15735 1006 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-220ENST00000458038 PRAMEF17Q5VTA0 474 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 FAM198BQ6UWH4 519 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 HOOK3Q86VS8 718 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 FDCSPQ8NFU4 85 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 OR52E1Q8NGJ3 308 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 KRT35Q92764 455 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 PNPLA2Q96AD5 504 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 SPATA13Q96N96 652 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 TBL1YQ9BQ87 522 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 CHRNA10Q9GZZ6 450 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms