RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 DEPDC4Q8N2C3 294 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 HM13Q8TCT9 377 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 C17orf50Q8WW18 174 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 DCSTAMPQ9H295 470 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 TCAF1Q9Y4C2 921 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 PRDX6P30041 224 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 BUD31P41223 144 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 EMP3P54852 163 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 ATP6V0D1P61421 351 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 PURAQ00577 322 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 VARS2Q5ST30 1063 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 SULT1C3Q6IMI6 304 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 TRIM40Q6P9F5 258 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 SLC2A7Q6PXP3 512 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 PAQR3Q6TCH7 311 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 TRPV3Q8NET8 790 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 OR13C4Q8NGS5 318 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 TDRD1Q9BXT4 1180 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 BCO2Q9BYV7 579 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 GBA3Q9H227 469 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 TMEM88BA6NKF7 163 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 A8MT66 165 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 ZNF99A8MXY4 864 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 FGF10O15520 208 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 OPN1SWP03999 348 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 NR2F1P10589 423 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 UMPSP11172 480 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 SCAIQ8N9R8 606 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 XAGE5Q8WWM1 108 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 GINS4Q9BRT9 223 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 FETUBQ9UGM5 382 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 PTCH2Q9Y6C5 1203 aa13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 OAS3Q9Y6K5 1087 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-216ENST00000457953 GSAPA4D1B5 854 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 FAM172BPA6NC97 362 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 PRMT5O14744 637 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 AURKAO14965 403 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 NDUFB5O43674 189 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 SLC25A14O95258 325 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 OR2B6P58173 313 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ILF2Q12905 390 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 SMU1Q2TAY7 513 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 TMEM236Q5W0B7 351 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 TBC1D19Q8N5T2 526 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 PSMG2Q969U7 264 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 VMP1Q96GC9 406 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ZNF778Q96MU6 729 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 PTPN18Q99952 460 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 MIOSQ9NXC5 875 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 PRELID1Q9Y255 219 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 TLL2Q9Y6L7 1015 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 NOTOA8MTQ0 251 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 FAM72CH0Y354 149 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 BCAS2O75934 225 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 CATP04040 527 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 HOXD12P35452 270 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 GK3PQ14409 553 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 NDUFA5Q16718 116 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 FAM72AQ5TYM5 149 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 PDE12Q6L8Q7 609 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 FAM72DQ6L9T8 149 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 EPGNQ6UW88 154 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 R3HCC1LQ7Z5L2 792 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 FAM72BQ86X60 149 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 RELTQ969Z4 430 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ITCHQ96J02 903 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 NLNQ9BYT8 704 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 KCNK13Q9HB14 408 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ING4Q9UNL4 249 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 MAP4K5Q9Y4K4 846 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 PTGDR2Q9Y5Y4 395 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 TNFRSF11BO00300 401 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 CXCR6O00574 342 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 AP3D1O14617 1153 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 KLF11O14901 512 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 XYLBO75191 536 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 TFAP2AP05549 437 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 PCSK6P29122 969 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ZNF135P52742 658 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ACLYP53396 1101 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 TYSND1Q2T9J0 566 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ERICH5Q6P6B1 374 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ZNF280BQ86YH2 543 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 GAL3ST1Q99999 423 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ZBTB26Q9HCK0 441 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 ZDHHC7Q9NXF8 308 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 GTF2IRD1Q9UHL9 959 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 UTRNP46939 3433 aa13.29□□□□□ -0.28
KCNMA1-216ENST00000457953 OR6C70A6NIJ9 312 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms