RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SERPINA9Q86WD7 417 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 OR4E2Q8NGC2 313 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 LCN9Q8WX39 176 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 TMEM121Q9BTD3 319 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 SRMSQ9H3Y6 488 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 COG4Q9H9E3 785 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 FANCEQ9HB96 536 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 ARNT2Q9HBZ2 717 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 GOLGA6L3A6NEY3 463 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 GOLGA6L6A8MZA4 724 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 MKRN2OSH3BPM6 223 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 SGTAO43765 313 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 CPNE3O75131 537 aaKnown RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 SEMA7AO75326 666 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 SCRG1O75711 98 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 METTL18O95568 372 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 GAS8O95995 478 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 FURINP09958 794 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 PRSS56P0CW18 603 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 COL8A1P27658 744 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 LMAN1P49257 510 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 CDKN1CP49918 316 aaPredicted RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 KPNA2P52292 529 aaKnown RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 TUBB4BP68371 445 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 TUBB2AQ13885 445 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 CRTC2Q53ET0 693 aaPredicted RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 SEL1L2Q5TEA6 688 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 CAPRIN2Q6IMN6 1127 aaKnown RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 FBXO38Q6PIJ6 1188 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 BPHLQ86WA6 291 aaPredicted RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 D2HGDHQ8N465 521 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 EFCAB3Q8N7B9 438 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 ACVR1CQ8NER5 493 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 SSC4DQ8WTU2 575 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 TUBB2BQ9BVA1 445 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 NLE1Q9NVX2 485 aaPredicted RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 SEMA5BQ9P283 1151 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 R3HDM2Q9Y2K5 976 aaKnown RBP15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 KCNMB2Q9Y691 235 aa15.32■□□□□ 0.04
CHCHD3-204ENST00000457942 TTLL8A6PVC2 850 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 AGAP14A8MT82 685 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 C21orf140B9A014 251 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 MATN2O00339 956 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 DDX3YO15523 660 aaKnown RBP15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 PSMD3O43242 534 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 MAP3K7O43318 606 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 CREG1O75629 220 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 DNAJB5O75953 348 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 PDGFAP04085 211 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 PREPP48147 710 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 GDF10P55107 478 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 CACNG1Q06432 222 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 MSLNQ13421 630 aaPredicted RBP15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 KCTD11Q693B1 232 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 DNAAF3Q8N9W5 541 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 STYXQ8WUJ0 223 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 MR1Q95460 341 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■■■ 45.8
CHCHD3-204ENST00000457942 PPM1MQ96MI6 270 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 FCRL4Q96PJ5 515 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 C19orf43Q9BQ61 176 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 HGH1Q9BTY7 390 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 ACTL8Q9H568 366 aa15.31■□□□□ 0.04
CHCHD3-204ENST00000457942 CRYBG3Q68DQ2 2970 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 A0A0U1RQJ8 604 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 C17orf113A0A1B0GUU1 675 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 SLC9B1P1A6NJY1 282 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 E7EVH7 732 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 ANKRD17O75179 2603 aaKnown RBP15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 RFPL1O75677 317 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 AP2A1O95782 977 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 IFNB1P01574 187 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 MSNP26038 577 aaKnown RBP15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 RPS15P62841 145 aaKnown RBP15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 KLF1Q13351 362 aaPredicted RBP15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 DBN1Q16643 649 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 SYTL3Q4VX76 610 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 FAM199XQ6PEV8 388 aaPredicted RBP15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 PPP1R21Q6ZMI0 780 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 LINC00523Q86TU6 105 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 HOOK3Q86VS8 718 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 KLHDC8BQ8IXV7 354 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 CARFQ8N187 725 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 CLDN19Q8N6F1 224 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 OR8K5Q8NH50 307 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 SLC35B2Q8TB61 432 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 ATG4AQ8WYN0 398 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 CDKN2AIPNLQ96HQ2 116 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 SLC7A5P2Q9GIP4 190 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 OR52A5Q9H2C5 316 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 CELSR2Q9HCU4 2923 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 KCND1Q9NSA2 647 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 POMT2Q9UKY4 750 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 CAPN6Q9Y6Q1 641 aa15.3■□□□□ 0.04
CHCHD3-204ENST00000457942 CREBBPQ92793 2442 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 IGLV3-16A0A075B6K0 115 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 TRBV5-4A0A0C4DH59 114 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms