RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 NEK5Q6P3R8 708 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 TRIM74Q86UV6 250 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 TRIM73Q86UV7 250 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 SLC41A1Q8IVJ1 513 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 ZFP28Q8NHY6 868 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 HEXDCQ8WVB3 486 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 TSNARE1Q96NA8 513 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 COPS8Q99627 209 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 C1QTNF7Q9BXJ2 289 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 TCF7L2Q9NQB0 619 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 SMOXQ9NWM0 555 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 VWA7Q9Y334 891 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 TRPM6Q9BX84 2022 aa15.58■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3DA0A087WVF3 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3IA0A087WXS9 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3EA0A087X179 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3KA0A087X1G2 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3FA6NER0 549 aaPredicted RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 IGLON5A6NGN9 336 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 LRRC72A6NJI9 287 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3LB9A6J9 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 CFAP99D6REC4 459 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 PRMT5O14744 637 aaPredicted RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 GPR39O43194 453 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ZBTB14O43829 449 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ESR1P03372 595 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3HP0C7X1 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ME2P23368 584 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 RPS3P23396 243 aaKnown RBP eCLIP15.57■□□□□ 0.088e-11■■■□□ 17.3
SNX17-204ENST00000453453 FMO4P31512 558 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 RPS9P46781 194 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 TPMTP51580 245 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ADARP55265 1226 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 RAB10P61026 200 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 DPTQ07507 201 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 SGCGQ13326 291 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 FZD5Q13467 585 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 RBM20Q5T481 1227 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 HECTD2Q5U5R9 776 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3GQ6DHY5 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3CQ6IPX1 549 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 FAM124AQ86V42 546 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 NLRP8Q86W28 1048 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TBC1D3Q8IZP1 549 aaPredicted RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 SPEM1Q8N4L4 309 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 HM13Q8TCT9 377 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 CLDN23Q96B33 292 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 DUS3LQ96G46 650 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 VPS35Q96QK1 796 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 AARSD1Q9BTE6 412 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 IER2Q9BTL4 223 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 BTBD1Q9H0C5 482 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 CHRDQ9H2X0 955 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 COG4Q9H9E3 785 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 CAB39LQ9H9S4 337 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 SGK2Q9HBY8 427 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 UTP6Q9NYH9 597 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 GNPTGQ9UJJ9 305 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ANKRD6Q9Y2G4 727 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 RAP2CQ9Y3L5 183 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 SIT1Q9Y3P8 196 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 CEPT1Q9Y6K0 416 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 UNC80Q8N2C7 3258 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 PRR23AA6NEV1 266 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 H3BMM5 538 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TRIM13O60858 407 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 RNGTTO60942 597 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 RHOBTB1O94844 696 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 PKMP14618 531 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 AKT1P31749 480 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 NSG1P42857 185 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 GPR1P46091 355 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ACADVLP49748 655 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ERFP50548 548 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 EMP3P54852 163 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 LDLRAP1Q5SW96 308 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 RAET1GQ6H3X3 334 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 CMC1Q7Z7K0 106 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ZNF554Q86TJ5 538 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 PHYKPLQ8IUZ5 450 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 CHERPQ8IWX8 916 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 DSELQ8IZU8 1212 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 PNPLA1Q8N8W4 532 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 OSBPL11Q9BXB4 747 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 MRPL1Q9BYD6 325 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 GRIP2Q9C0E4 1043 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 ITM2CQ9NQX7 267 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 TUBA8Q9NY65 449 aaPredicted RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 TMEM216Q9P0N5 145 aa15.57■□□□□ 0.08
SNX17-204ENST00000453453 RSL24D1Q9UHA3 163 aaKnown RBP15.57■□□□□ 0.08
SNX17-204ENST00000453453 A0A087X1B8 175 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 A0A096LPK6 155 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 A0A1W2PQU0 124 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 E5RI56 91 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 HDAC3O15379 428 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 OR1I1O60431 355 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 VPS26AO75436 327 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 APBB3O95704 486 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 C8BP07358 591 aa15.56■□□□□ 0.08
SNX17-204ENST00000453453 CDH2P19022 906 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms