RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 GCNT7Q6ZNI0 430 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 LRRTM4Q86VH4 590 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TRAPPC5Q8IUR0 188 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 WDR75Q8IWA0 830 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CFAP206Q8IYR0 622 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TMEM145Q8NBT3 493 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CCDC197Q8NCU1 140 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 HM13Q8TCT9 377 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 MAPK15Q8TD08 544 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ZNF483Q8TF39 744 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 UBTD2Q8WUN7 234 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 SREK1Q8WXA9 508 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 RLN3Q8WXF3 142 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 BIRC7Q96CA5 298 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 RHBDF1Q96CC6 855 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 RMDN2Q96LZ7 410 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 NSUN5Q96P11 429 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 MYOCQ99972 504 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TMEM79Q9BSE2 394 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TRMOQ9BU70 441 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TRIM55Q9BYV6 548 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TPSD1Q9BZJ3 242 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ZDHHC5Q9C0B5 715 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ILKAPQ9H0C8 392 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 OR52A5Q9H2C5 316 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 RMI1Q9H9A7 625 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PARVBQ9HBI1 364 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TM7SF3Q9NS93 570 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 UTP6Q9NYH9 597 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CD274Q9NZQ7 290 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 MARCOQ9UEW3 520 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 DCTN4Q9UJW0 460 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ZNF225Q9UK10 706 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PCTPQ9UKL6 214 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PNMA8BQ9ULN7 279 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ARL2BPQ9Y2Y0 163 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 SIT1Q9Y3P8 196 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PRKAB1Q9Y478 270 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 HS3ST3A1Q9Y663 406 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 USH1CQ9Y6N9 552 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 RALGAPA1Q6GYQ0 2036 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 KRT87PA6NCN2 255 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 METTL12A8MUP2 240 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 ARHGEF33A8MVX0 844 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 TMEM233B4DJY2 109 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 H3BM21 787 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 MATN2O00339 956 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 TOR1BO14657 336 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 FPGTO14772 594 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 PI15O43692 258 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 SNX2O60749 519 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 ZNF217O75362 1048 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 C1orf105O95561 183 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 APBB3O95704 486 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 GUCA1CO95843 209 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 PDGFBP01127 241 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 JUNP05412 331 aaKnown RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 DCNP07585 359 aaKnown RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 VCLP18206 1134 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 HSPA7P48741 367 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 PXNP49023 591 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 IDH3AP50213 366 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 RPL14P50914 215 aaKnown RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 ARFIP2P53365 341 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 AQP5P55064 265 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 NAA20P61599 178 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 YPEL5P62699 121 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 SH3BP2P78314 561 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 PLOD1Q02809 727 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 CLCQ05315 142 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 RPA4Q13156 261 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 SP140Q13342 867 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 NFATC4Q14934 902 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 PLA2G4EQ3MJ16 856 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 UGT3A2Q3SY77 523 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 CCSMST1Q4G0I0 132 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 CFAP157Q5JU67 520 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 CWF19L1Q69YN2 538 aaKnown RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 EPGNQ6UW88 154 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 MBOAT1Q6ZNC8 495 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 FRA10AC1Q70Z53 315 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 RAB44Q7Z6P3 723 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 ABI3BPQ7Z7G0 1075 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 CUZD1Q86UP6 607 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 AMZ2Q86W34 360 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 KLHDC8AQ8IYD2 350 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 CAMKK1Q8N5S9 505 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 FAM160A2Q8N612 972 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 FBXO15Q8NCQ5 510 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 TRPC4APQ8TEL6 797 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 PPP4R1Q8TF05 950 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 AGAP11Q8TF27 550 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 OR1E3Q8WZA6 343 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 TMEM159Q96B96 161 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 NECAB3Q96P71 396 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 UHRF1Q96T88 793 aaPredicted RBP5.86□□□□□ -1.47
SDC4P-201ENST00000453285 EBF4Q9BQW3 602 aa5.86□□□□□ -1.47
SDC4P-201ENST00000453285 SIKE1Q9BRV8 207 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms