RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PRKAR1AP10644 381 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF18P17022 549 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF182P17025 639 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF24P17028 368 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 LBPP18428 481 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TNNI3P19429 210 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PRPH2P23942 346 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDC25AP30304 524 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TIA1P31483 386 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDKN1AP38936 164 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 MMP13P45452 471 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPC5P78333 572 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 OTUD4Q01804 1114 aaKnown RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 MTAPQ13126 283 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TOB2Q14106 344 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 DRAP1Q14919 205 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PDK3Q15120 406 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CHRNA6Q15825 494 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 HIST2H2ACQ16777 129 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 FBXO43Q4G163 708 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 MPPE1Q53F39 396 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 SGO1Q5FBB7 561 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 LRRC73Q5JTD7 316 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PRR31Q5SQ13 230 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PIP5KL1Q5T9C9 394 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CARD17Q5XLA6 110 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM90A2PQ658T7 463 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM198Q66K66 360 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 NCR3LG1Q68D85 454 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 C18orf63Q68DL7 685 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TXNDC8Q6A555 127 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 C8orf74Q6P047 294 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 DEGS2Q6QHC5 323 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 IL20RBQ6UXL0 311 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 USP30Q70CQ3 517 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 LDB1Q86U70 411 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ADIPOR2Q86V24 386 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TDRPQ86YL5 185 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CAMK1DQ8IU85 385 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 MISPQ8IVT2 679 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 UBE2J2Q8N2K1 259 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 FBXO39Q8N4B4 442 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CSGALNACT2Q8N6G5 542 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PSD4Q8NDX1 1056 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 B4GALNT2Q8NHY0 566 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 RAB3IL1Q8TBN0 382 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 EDAQ92838 391 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 RIT1Q92963 219 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 KIAA1143Q96AT1 154 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRMT61AQ96FX7 289 aaKnown RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 OXNAD1Q96HP4 312 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDKN2AIPNLQ96HQ2 116 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLIC6Q96NY7 704 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 FCRL4Q96PJ5 515 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 COQ7Q99807 217 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 FICDQ9BVA6 458 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 HDHD5Q9BXW7 423 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 FN3KQ9H479 309 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM231Q9H6L2 316 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ROPN1Q9HAT0 212 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 LMAN1LQ9HAT1 526 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TREM1Q9NP99 234 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZCCHC3Q9NUD5 404 aaKnown RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 NUDT15Q9NV35 164 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 GTSE1Q9NYZ3 720 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 EHD3Q9NZN3 535 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 EMC3Q9P0I2 261 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 NDUFA13Q9P0J0 144 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 KLHL9Q9P2J3 617 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CD300AQ9UGN4 299 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CHMP2BQ9UQN3 213 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC9A8Q9Y2E8 581 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PADI2Q9Y2J8 665 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATP6V1DQ9Y5K8 247 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 MAU2Q9Y6X3 613 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZMYM3Q14202 1370 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PARD3Q8TEW0 1356 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 NPC1L1Q9UHC9 1359 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF536O15090 1300 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 A0A0G2JNJ9 132 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 MAGEA13PA6NCF6 341 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 WIPF3A6NGB9 483 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 SUPT3HB4E1H0 165 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 KBTBD13C9JR72 458 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRR23D1E9PI22 279 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 RRP8O43159 456 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF208O43345 1280 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 STRNO43815 780 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 NOBOXO60393 691 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 VPS26AO75436 327 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 RSL1D1O76021 490 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 KLHL2O95198 593 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 POMCP01189 267 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 OPN1LWP04000 364 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 HEXAP06865 529 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRR23D2P0DMB1 279 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR8G3PP0DMU2 310 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TCF4P15884 667 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF28P17035 718 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms