RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TMEM184BQ9Y519 407 aaPredicted RBP9.42□□□□□ -0.9
USP54-207ENST00000451492 RPS6KL1Q9Y6S9 549 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 AHCTF1Q8WYP5 2266 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 C17orf113A0A1B0GUU1 675 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TCRBV7S3A2A0A539 114 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 GOLGA6L3A6NEY3 463 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 ZNF891A8MT65 544 aaPredicted RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 IQCF5A8MTL0 148 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 GOLGA8KD6RF30 607 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 GOLGA8TH3BQL2 631 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TK2O00142 265 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 BTN3A3O00478 584 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 LIN7AO14910 233 aaPredicted RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 NKX2-8O15522 239 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 AP2A2O94973 939 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 NTRK1P04629 796 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 PVRP15151 417 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 F8A1P23610 371 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 MAP4P27816 1152 aaKnown RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 NMBRP28336 390 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 STAT5AP42229 794 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 ABHD18Q0P651 414 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 CDC20Q12834 499 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 GPS1Q13098 491 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 LAMB3Q13751 1172 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 DEFB110Q30KQ9 67 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 ZNF658BQ4V348 819 aaPredicted RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 PWWP2BQ6NUJ5 590 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TTC27Q6P3X3 843 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 C6orf15Q6UXA7 325 aaPredicted RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 PACS1Q6VY07 963 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 ZNF534Q76KX8 674 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 PRICKLE2Q7Z3G6 844 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TRIM73Q86UV7 250 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TAX1BP1Q86VP1 789 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TMEM126BQ8IUX1 230 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 SLC35F6Q8N357 371 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 ESX1Q8N693 406 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 PRELID2Q8N945 189 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 EXD3Q8N9H8 876 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 CFAP61Q8NHU2 1237 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TFGQ92734 400 aaPredicted RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 TTC1Q99614 292 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 C19orf43Q9BQ61 176 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 SLC12A9Q9BXP2 914 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 RAB33BQ9H082 229 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 FGF21Q9NSA1 209 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 TRMT1Q9NXH9 659 aaKnown RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 MARCH4Q9P2E8 410 aaPredicted RBP9.41□□□□□ -0.9
USP54-207ENST00000451492 ASF1AQ9Y294 204 aa9.41□□□□□ -0.9
USP54-207ENST00000451492 SLC9B1P1A6NJY1 282 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 TMEM150CB9EJG8 249 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 GOLGA8MH3BSY2 632 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 QSOX1O00391 747 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 CD3EAPO15446 510 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 AVILO75366 819 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 SCRG1O75711 98 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 ZBTB11O95625 1053 aaPredicted RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 KRT14P02533 472 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 F7P08709 466 aaPredicted RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 CCNYL3P0C7X3 344 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 FGF5P12034 268 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 ST6GAL1P15907 406 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 OAS2P29728 719 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 EIF3BP55884 814 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 RPS18P62269 152 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 HSD11B2P80365 405 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 ACY1Q03154 408 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 HSPA14Q0VDF9 509 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 ERV3-1Q14264 604 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 IL11RAQ14626 422 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 DEFB109BQ30KR1 87 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 PCID2Q5JVF3 399 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 TMTC4Q5T4D3 741 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 PRAMEF17Q5VTA0 474 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 LYPLAL1Q5VWZ2 237 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 PTRHD1Q6GMV3 140 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 CASC4Q6P4E1 433 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 CYB5D1Q6P9G0 228 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 FAM199XQ6PEV8 388 aaPredicted RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 DRICH1Q6PGQ1 229 aaPredicted RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 NLRP9Q7RTR0 991 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 ZNF605Q86T29 641 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 HOOK3Q86VS8 718 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 AMIGO1Q86WK6 493 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 MPP5Q8N3R9 675 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 LMNTD1Q8N9Z9 388 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 LSM14AQ8ND56 463 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 MAGOHBQ96A72 148 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 FAM136AQ96C01 138 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 MED8Q96G25 268 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 SLC41A2Q96JW4 573 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 RUFY1Q96T51 708 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 CD180Q99467 661 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 TRIM56Q9BRZ2 755 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 SPRY4Q9C004 299 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 TRIT1Q9H3H1 467 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 FANCEQ9HB96 536 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 EIF2B3Q9NR50 452 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 ACTR10Q9NZ32 417 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms