RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZC3H12BQ5HYM0 836 aaKnown RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 RBM20Q5T481 1227 aaKnown RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 NCBP2-AS2Q69YL0 99 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 LAIR1Q6GTX8 287 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 SLFN12LQ6IEE8 588 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 OR6B2Q6IFH4 312 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 KIAA1324Q6UXG2 1013 aaKnown RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 ANKS3Q6ZW76 656 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 BNIPLQ7Z465 357 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 PRSS42Q7Z5A4 293 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 KIF18BQ86Y91 864 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 DTWD1Q8N5C7 304 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 ANKRD31Q8N7Z5 1873 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 ZNF557Q8N988 423 aaPredicted RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 OR8H1Q8NGG4 311 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 TRPM4Q8TD43 1214 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 HEXDCQ8WVB3 486 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 FCGR1BQ92637 280 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 RNF34Q969K3 372 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 P2RY11Q96G91 374 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 Q96MT0 163 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 ZNF578Q96N58 590 aaPredicted RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 TRAF4Q9BUZ4 470 aaPredicted RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 LRRC3Q9BY71 257 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 SLC22A4Q9H015 551 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 PPA2Q9H2U2 334 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 SERHL2Q9H4I8 314 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 WBP1LQ9NX94 342 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 CDH9Q9ULB4 789 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 MAN2B2Q9Y2E5 1009 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 A0A0B4J293 547 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SLC12A8A0AV02 714 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 ASPDHA6ND91 283 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 FAM25EA8MYX2 175 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 ZNF254O75437 659 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SLC22A5O76082 557 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 MICAL2O94851 1124 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 CYBBP04839 570 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 ANXA6P08133 673 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SERPINF2P08697 491 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 ITGAMP11215 1152 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 IGFBP4P22692 258 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 KRT20P35900 424 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 BCAT1P54687 386 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 KCNK10P57789 538 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 GRB7Q14451 532 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 DPYSL2Q16555 572 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SMN1Q16637 294 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 TRIM60Q495X7 471 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 PAGE3Q5JUK9 113 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 LAMTOR1Q6IAA8 161 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TYW3Q6IPR3 259 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 BRAT1Q6PJG6 821 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 FAM183BPQ6ZVS7 135 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 DGLUCYQ7Z3D6 616 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TRIM48Q8IWZ4 208 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 VWA5B2Q8N398 1253 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 PAF1Q8N7H5 531 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 DNAJA4Q8WW22 397 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 RNF31Q96EP0 1072 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 MAGEB10Q96LZ2 347 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 FRMD6Q96NE9 622 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 CSPG4P5Q96PW8 444 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 GTPBP2Q9BX10 602 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 FAM83DQ9H4H8 585 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SPON1Q9HCB6 807 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 ZNF224Q9NZL3 707 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TMEFF2Q9UIK5 374 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 NOSIPQ9Y314 301 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 FAM95CA0A1B0GW59 222 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 CIB4A0PJX0 185 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SOWAHBA6NEL2 793 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 BTN3A3O00478 584 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SGTAO43765 313 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 CYP7B1O75881 506 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 AHSGP02765 367 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 HOXD4P09016 255 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 TSPAN8P19075 237 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TGFB2P61812 414 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 DAB2P98082 770 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 UBE3AQ05086 875 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 RGS1Q08116 209 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 HYAL2Q12891 473 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 PPP1R8Q12972 351 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 MTMR1Q13613 665 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 RCAN2Q14206 197 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 FSCN1Q16658 493 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 TKFCQ3LXA3 575 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 CRY2Q49AN0 593 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 IGSF11Q5DX21 431 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 PRSS36Q5K4E3 855 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 COX20Q5RI15 118 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 CERCAMQ5T4B2 595 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 CAPN13Q6MZZ7 669 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 TIGD7Q6NT04 549 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 ARHGAP36Q6ZRI8 547 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 AHSA2Q719I0 299 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TLK2Q86UE8 772 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 PHC2Q8IXK0 858 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 ZNF567Q8N184 647 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms