RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 C19orf60Q96EN9 201 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 NOL11Q9H8H0 719 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 MBNL1Q9NR56 388 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 ARHGEF3Q9NR81 526 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 ZNF225Q9UK10 706 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 CAPN7Q9Y6W3 813 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 MAN2B1O00754 1011 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 CHUKO15111 745 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 DCXO43602 365 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 PSIP1O75475 530 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 UROSP10746 265 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 ACADMP11310 421 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 CD72P21854 359 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 PLOD1Q02809 727 aaPredicted RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 CDC16Q13042 620 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 INPP5AQ14642 412 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 IRF4Q15306 451 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 EFL1Q7Z2Z2 1120 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 HORMAD1Q86X24 394 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 CPSF7Q8N684 471 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 TP53I13Q8NBR0 393 aaPredicted RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 C1QTNF7Q9BXJ2 289 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 SLC17A9Q9BYT1 436 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 WDR26Q9H7D7 661 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 OPTCQ9UBM4 332 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 TAGLN3Q9UI15 199 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3DA0A087WVF3 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3IA0A087WXS9 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3EA0A087X179 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3KA0A087X1G2 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3FA6NER0 549 aaPredicted RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3LB9A6J9 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 K7EPI3 171 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 SLC22A2O15244 555 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 CCNT2O60583 730 aaKnown RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 CRCPO75575 148 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 STK16O75716 305 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 OTCP00480 354 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 ENO1P06733 434 aaKnown RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3HP0C7X1 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 PRDX3P30048 256 aaKnown RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 CCR3P51677 355 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 ABRQ12979 859 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3GQ6DHY5 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3CQ6IPX1 549 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 MBOAT1Q6ZNC8 495 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 Q7L0L9 218 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 CFAP206Q8IYR0 622 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TBC1D3Q8IZP1 549 aaPredicted RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 OR52B6Q8NGF0 335 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 OR2L2Q8NH16 312 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TWIST2Q8WVJ9 160 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 KCNA7Q96RP8 456 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 LGR4Q9BXB1 951 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 IPPKQ9H8X2 491 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 MRGBPQ9NV56 204 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 TMEM98Q9Y2Y6 226 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 PRR23AA6NEV1 266 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 MGAT4DA6NG13 374 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 GPR89AB7ZAQ6 455 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 H3BM21 787 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 OR7A17O14581 309 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 POP7O75817 140 aaKnown RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 GPR89BP0CG08 455 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 NDUFV2P19404 249 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 MAP4P27816 1152 aaKnown RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 PTPN4P29074 926 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 PBLDP30039 288 aaPredicted RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 ADSLP30566 484 aaPredicted RBP13.94□□□□□ -0.18
USP39-207ENST00000450066 PIK3CGP48736 1102 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 CHSY3Q70JA7 882 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 C11orf96Q7Z7L8 435 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 CHCHD4Q8N4Q1 142 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 ASB12Q8WXK4 309 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 FOPNLQ96NB1 174 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 ZNF385DQ9H6B1 395 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 ANGPTL3Q9Y5C1 460 aa13.94□□□□□ -0.18
USP39-207ENST00000450066 LOC730098B7Z3J9 87 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 PIP5K1BO14986 540 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 CHEK2O96017 543 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 CATP04040 527 aaKnown RBP13.93□□□□□ -0.18
USP39-207ENST00000450066 PDHA2P29803 388 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 GDF5P43026 501 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 ERVPABLB-1P60509 514 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 MLF2Q15773 248 aaPredicted RBP13.93□□□□□ -0.18
USP39-207ENST00000450066 PUS10Q3MIT2 529 aaKnown RBP13.93□□□□□ -0.18
USP39-207ENST00000450066 TMEM198Q66K66 360 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 ZNF852Q6ZMS4 543 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 LARP4Q71RC2 724 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP39-207ENST00000450066 KIF2BQ8N4N8 673 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 HM13Q8TCT9 377 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 KLK6Q92876 244 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 ATP6V1E2Q96A05 226 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms