RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SYTL3Q4VX76 610 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 TSTD2Q5T7W7 516 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 C4orf22Q6V702 233 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 PACS1Q6VY07 963 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 CERS6Q6ZMG9 384 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 D2HGDHQ8N465 521 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 PHC3Q8NDX5 983 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 PPHLN1Q8NEY8 458 aaKnown RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 OR6P1Q8NGX9 317 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 ELMO1Q92556 727 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 CASS4Q9NQ75 786 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 GEMIN8Q9NWZ8 242 aaKnown RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 KCND3Q9UK17 655 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 CROTQ9UKG9 612 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 PADI1Q9ULC6 663 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 RIMKLBQ9ULI2 386 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 DRG1Q9Y295 367 aaKnown RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 ZKSCAN5Q9Y2L8 839 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 PRSS21Q9Y6M0 314 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 COL6A6A6NMZ7 2263 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 J3QKU1 62 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 MAP3K7O43318 606 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 CEP104O60308 925 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 KATNA1O75449 491 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 TIAF1O95411 115 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 FGGP02679 453 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 ZSCAN5DPP0CG00 497 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 RPL22P35268 128 aaKnown RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 TUBB4BP68371 445 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 BASP1P80723 227 aaKnown RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 PLOD1Q02809 727 aaPredicted RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 PRKG2Q13237 762 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 TUBB2AQ13885 445 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 BOP1Q14137 746 aaKnown RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 BRD3Q15059 726 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 SIX1Q15475 284 aaPredicted RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 ZNF658BQ4V348 819 aaPredicted RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 FASTKD1Q53R41 847 aaKnown RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 PWWP2BQ6NUJ5 590 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 DRICH1Q6PGQ1 229 aaPredicted RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 GLIS1Q8NBF1 620 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 OR52E1Q8NGJ3 308 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 OR13J1Q8NGT2 312 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 OR4L1Q8NH43 312 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 HGH1Q9BTY7 390 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 TUBB2BQ9BVA1 445 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 ADNPQ9H2P0 1102 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 TFB2MQ9H5Q4 396 aaKnown RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 FANCEQ9HB96 536 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 C1GALT1Q9NS00 363 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 SLC2A6Q9UGQ3 507 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 ANAPC5Q9UJX4 755 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 POMT2Q9UKY4 750 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 ASF1AQ9Y294 204 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 TCAF1Q9Y4C2 921 aa14.85□□□□□ -0.03
CHD3-205ENST00000449744 MRPS18BQ9Y676 258 aaKnown RBP14.85□□□□□ -0.03
CHD3-205ENST00000449744 KALRNO60229 2985 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 AP3B1O00203 1094 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 SLC28A2O43868 658 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 NTRK1P04629 796 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 F8A1P23610 371 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 OAS2P29728 719 aaKnown RBP14.84□□□□□ -0.03
CHD3-205ENST00000449744 POLE2P56282 527 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 SESN2P58004 480 aaPredicted RBP14.84□□□□□ -0.03
CHD3-205ENST00000449744 GPR19Q15760 415 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 DEFB109BQ30KR1 87 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 CRTC2Q53ET0 693 aaPredicted RBP14.84□□□□□ -0.03
CHD3-205ENST00000449744 FBXO38Q6PIJ6 1188 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 PRICKLE2Q7Z3G6 844 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 HOOK3Q86VS8 718 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 AMIGO1Q86WK6 493 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 TMEM126BQ8IUX1 230 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 OR8K5Q8NH50 307 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 PEX13Q92968 403 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 PPM1MQ96MI6 270 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 TSSK1BQ9BXA7 367 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 SLC25A18Q9H1K4 315 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 LHX9Q9NQ69 397 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 EIF2B3Q9NR50 452 aaKnown RBP14.84□□□□□ -0.03
CHD3-205ENST00000449744 KCND1Q9NSA2 647 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 STARD5Q9NSY2 213 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 BTRCQ9Y297 605 aa14.84□□□□□ -0.03
CHD3-205ENST00000449744 SLC9B1P1A6NJY1 282 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 C2orf74A8MZ97 194 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 BTN3A3O00478 584 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 BTN3A1O00481 513 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 SCRG1O75711 98 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 ITGB6P18564 788 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 PRDX3P30048 256 aaKnown RBP14.83□□□□□ -0.04
CHD3-205ENST00000449744 CCZ1BP86790 482 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 CCZ1P86791 482 aaPredicted RBP14.83□□□□□ -0.04
CHD3-205ENST00000449744 ACVR1Q04771 509 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 KCNAB2Q13303 367 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 DNASE1L3Q13609 305 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 AARS2Q5JTZ9 985 aaKnown RBP14.83□□□□□ -0.04
CHD3-205ENST00000449744 PCID2Q5JVF3 399 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 TBC1D21Q8IYX1 336 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 APOBEC4Q8WW27 367 aaKnown RBP14.83□□□□□ -0.04
CHD3-205ENST00000449744 ZNF778Q96MU6 729 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 TLR10Q9BXR5 811 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms