RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TAF1AQ15573 450 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 INSCQ1MX18 579 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 DNAJC21Q5F1R6 531 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 COLEC12Q5KU26 742 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 ALS2CLQ60I27 953 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 CYB5D1Q6P9G0 228 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 WASH2PQ6VEQ5 465 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 CAPN12Q6ZSI9 719 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 LRRTM4Q86VH4 590 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 GPR26Q8NDV2 337 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 FBXO36Q8NEA4 188 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 STARD8Q92502 1023 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 STAMBPL1Q96FJ0 436 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 TIMM29Q9BSF4 260 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 PLAC1Q9HBJ0 212 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 WASH6PQ9NQA3 447 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 RPS6KL1Q9Y6S9 549 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 ZNF106Q9H2Y7 1883 aaKnown RBP13.46□□□□□ -0.26
PDLIM2-213ENST00000448520 RP1L1Q8IWN7 2480 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 NDC80O14777 642 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 CDK14O94921 469 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 RECKO95980 971 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 TYRP1P17643 537 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 VCLP18206 1134 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 IDSP22304 550 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 ADRA1DP25100 572 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 TUBB4BP68371 445 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 DEFB109BQ30KR1 87 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 PCID2Q5JVF3 399 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 TSTD2Q5T7W7 516 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 AGAP9Q5VTM2 703 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 C6orf15Q6UXA7 325 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 CENPUQ71F23 418 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 ZBED8Q8IZ13 594 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 UNC5BQ8IZJ1 945 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 PPHLN1Q8NEY8 458 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 OR4K2Q8NGD2 314 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 BRSK1Q8TDC3 778 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 ZNF669Q96BR6 464 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 MFSD3Q96ES6 412 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 ZDHHC12Q96GR4 267 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 ABHD17AQ96GS6 310 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 RANBP9Q96S59 729 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 POT1Q9NUX5 634 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 SIDT1Q9NXL6 827 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 IL1RAPL1Q9NZN1 696 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 OGFRQ9NZT2 677 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 HACD3Q9P035 362 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 SCHIP1Q9P0W5 487 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 ZNF624Q9P2J8 865 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 EPHA6Q9UF33 1036 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 MTRF1LQ9UGC7 380 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 SLC23A2Q9UGH3 650 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 SOX13Q9UN79 622 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 TEX264Q9Y6I9 313 aa13.45□□□□□ -0.26
PDLIM2-213ENST00000448520 SEC16AO15027 2179 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 MROH6A6NGR9 719 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 GPR39O43194 453 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 F7P08709 466 aaPredicted RBP13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 BPIP17213 487 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 LPOP22079 712 aaPredicted RBP13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 OAS2P29728 719 aaKnown RBP13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 CA5AP35218 305 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 MAGEA4P43358 317 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 GFERP55789 205 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 SKIDA1Q1XH10 827 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 ZNF648Q5T619 568 aaPredicted RBP13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 ZDHHC20Q5W0Z9 365 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 WDR93Q6P2C0 686 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 CRTC3Q6UUV7 619 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 UNC5AQ6ZN44 842 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 DTX3LQ8TDB6 740 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 TGM7Q96PF1 710 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 VPS35Q96QK1 796 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 EBNA1BP2Q99848 306 aaKnown RBP13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 KIFC1Q9BW19 673 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 RAB33BQ9H082 229 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 EPN3Q9H201 632 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 TRABDQ9H4I3 376 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 ZNF768Q9H5H4 540 aaKnown RBP13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 SLC40A1Q9NP59 571 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 ARFGAP3Q9NP61 516 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 ZNF71Q9NQZ8 489 aaPredicted RBP13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 SAMD15Q9P1V8 674 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 FKBPLQ9UIM3 349 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 KCND3Q9UK17 655 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 RAB21Q9UL25 225 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 SLC30A1Q9Y6M5 507 aa13.44□□□□□ -0.26
PDLIM2-213ENST00000448520 PRR19A6NJB7 356 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 STX7O15400 261 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms