RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RBM18Q96H35 190 aaKnown RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 SLC30A2Q9BRI3 323 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 HHATLQ9HCP6 504 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 DNAJB4Q9UDY4 337 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 TLL2Q9Y6L7 1015 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 WDR27A2RRH5 827 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CCDC85CA6NKD9 419 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CERS1P27544 350 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 FMO3P31513 532 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 IL6STP40189 918 aaPredicted RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 GPX6P59796 221 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZBED5Q49AG3 693 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 MPP7Q5T2T1 576 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZDHHC20Q5W0Z9 365 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZFP82Q8N141 532 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 GMCL1P1Q8NEA9 526 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 PRG4Q92954 1404 aaPredicted RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 CENPNQ96H22 339 aaPredicted RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 PDLIM2Q96JY6 352 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZNF75AQ96N20 296 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ALG9Q9H6U8 611 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZNHIT2Q9UHR6 403 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 HCN2Q9UL51 889 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CPN2P22792 545 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CHKAP35790 457 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 DNAJC10Q8IXB1 793 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 UQCC2Q9BRT2 126 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 YIPF4Q9BSR8 244 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 IPPKQ9H8X2 491 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ICKQ9UPZ9 632 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ATG4BQ9Y4P1 393 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 SPIN1Q9Y657 262 aaPredicted RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 FPGTO14772 594 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 LPLP06858 475 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CCKBRP32239 447 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CSTF2P33240 577 aaKnown RBP eCLIP8.82□□□□□ -1
NIPBL-202ENST00000448238 SERINC3Q13530 473 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 LAPTM5Q13571 262 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 KCTD9Q7L273 389 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 METTL4Q8N3J2 472 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CNOT9Q92600 299 aaKnown RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 NDC1Q9BTX1 674 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 FN3KQ9H479 309 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CNOT11Q9UKZ1 510 aaKnown RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 PCDHA11Q9Y5I1 949 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CDC7O00311 574 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 CYB561D2O14569 222 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 XPNPEP2O43895 674 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 AGR2O95994 175 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 COL6A1P12109 1028 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SLC7A1P30825 629 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PMPCAQ10713 525 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RIN1Q13671 783 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 NAA30Q147X3 362 aaPredicted RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 GRM3Q14832 879 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 UBAP2Q5T6F2 1119 aaKnown RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 KIAA0319Q5VV43 1072 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 POGLUT1Q8NBL1 392 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TMEM143Q96AN5 459 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ZDHHC12Q96GR4 267 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ZBED3Q96IU2 234 aaPredicted RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 ASB8Q9H765 288 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 GREM2Q9H772 168 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 KIF25Q9UIL4 384 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TP53TG5Q9Y2B4 290 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ADGRF5Q8IZF2 1346 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ATMINO43313 823 aaPredicted RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 KCNJ13O60928 360 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ENDOD1O94919 500 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 DIRAS3O95661 229 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SFTPBP07988 381 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 CDH8P55286 799 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 MAP4K2Q12851 820 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 GFOD2Q3B7J2 385 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ATG9BQ674R7 924 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PGAP1Q75T13 922 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 GALNT5Q7Z7M9 940 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SEMA6DQ8NFY4 1073 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 DNAJB8Q8NHS0 232 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 OSBPL7Q9BZF2 842 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 USP29Q9HBJ7 922 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ATP13A1Q9HD20 1204 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 GTF2IRD1Q9UHL9 959 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 IGF1RP08069 1367 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TPP1O14773 563 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RFPL1O75677 317 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PRKCGP05129 697 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 CYP11B2P19099 503 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PPIGQ13427 754 aaKnown RBP eCLIP8.81□□□□□ -14e-6■■□□□ 12.9
NIPBL-202ENST00000448238 HEPACAMQ14CZ8 416 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ERFEQ4G0M1 354 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TMEM31Q5JXX7 168 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 HES5Q5TA89 166 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SLC2A7Q6PXP3 512 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RBFAQ8N0V3 343 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 GPR156Q8NFN8 814 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 KLHL6Q8WZ60 621 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 GLYATL1Q969I3 302 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TMEM47Q9BQJ4 181 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TBX20Q9UMR3 447 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms