RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 LEPRP48357 1165 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 PGM2L1Q6PCE3 622 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 CREB3L2Q70SY1 520 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 IL31RAQ8NI17 732 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ASPNQ9BXN1 380 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 UBIAD1Q9Y5Z9 338 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SPATA31C2B4DYI2 1134 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 FAM198BQ6UWH4 519 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 TICAM1Q8IUC6 712 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 TSPEARQ8WU66 669 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 MUL1Q969V5 352 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SNX10Q9Y5X0 201 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PRORSD1PA6NEY8 169 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 MRPS14O60783 128 aaKnown RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 YWHAQP27348 245 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SMCO1Q147U7 214 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 LINGO1Q96FE5 620 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 FCRL4Q96PJ5 515 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 WACQ9BTA9 647 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 NAA50Q9GZZ1 169 aaKnown RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 BCAS3Q9H6U6 928 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 N6AMT1Q9Y5N5 214 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ADAM23O75077 832 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 OR10G2Q8NGC3 310 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SELENOMQ8WWX9 145 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 IL4I1Q96RQ9 567 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ERVK13-1Q9NX77 482 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 PCDHB8Q9UN66 801 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 PIK3R6Q5UE93 754 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 CTRCQ99895 268 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 FANCFQ9NPI8 374 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 DLGAP1O14490 977 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 MTRF1O75570 445 aaKnown RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 APOC3P02656 99 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SNHG28P0DPA3 235 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 GADD45AP24522 165 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ANXA8L1Q5VT79 327 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SPRED1Q7Z699 444 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 PIAS4Q8N2W9 510 aaPredicted RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 MNTQ99583 582 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SYT11Q9BT88 431 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SLITRK2Q9H156 845 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 PPA2Q9H2U2 334 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 COQ4Q9Y3A0 265 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ATRNL1Q5VV63 1379 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 C7orf72A4D263 438 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 TCAF2A6NFQ2 919 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 DPYSL4O14531 572 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 CENPAP49450 140 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 CCDC115Q96NT0 180 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 CNOT1A5YKK6 2376 aaKnown RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 EIF3FO00303 357 aaPredicted RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 SLC11A2P49281 568 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ETV1P50549 477 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SLC25A52Q3SY17 297 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 CHMP1BQ7LBR1 199 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 Q8N402 240 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 OR4L1Q8NH43 312 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 C11orf24Q96F05 449 aaPredicted RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 MED8Q96G25 268 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 FTHL17Q9BXU8 183 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ZNF879B4DU55 563 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 EFEMP1Q12805 493 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 DOK6Q6PKX4 331 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ACDQ96AP0 544 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 COQ10AQ96MF6 247 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 PANX1Q96RD7 426 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 MMP28Q9H239 520 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 IL1RAPQ9NPH3 570 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.75□□□□□ -1.178e-9■■■■■ 30
SMG1-202ENST00000446231 B4GALT4O60513 344 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 JUNBP17275 347 aaPredicted RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 PRKCDQ05655 676 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 GNASQ5JWF2 1037 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SNX29P2Q8IUI4 249 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 CCDC120Q96HB5 630 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 MAB21L2Q9Y586 359 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 LMTK3Q96Q04 1460 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 TTPAP49638 278 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SLC36A3Q495N2 470 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 USP39Q53GS9 565 aaKnown RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 AGAP6Q5VW22 663 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 VASH1Q7L8A9 365 aaPredicted RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 GLT6D1Q7Z4J2 308 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 AGAP4Q96P64 663 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 UQCC2Q9BRT2 126 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 BHMG1C9JSJ3 638 aaPredicted RBP7.75□□□□□ -1.17
SMG1-202ENST00000446231 OR2B3O76000 313 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 POU2F1P14859 743 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 WSCD1Q658N2 575 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 POLHQ9Y253 713 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ALDH9A1P49189 494 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 DGKQP52824 942 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 TRIM40Q6P9F5 258 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SLC13A3Q8WWT9 602 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 PSD2Q9BQI7 771 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 SPATA9Q9BWV2 254 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 TCRBV3S1A0A5B6 114 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 RAMP2O60895 175 aa7.75□□□□□ -1.17
SMG1-202ENST00000446231 ZNF26P17031 533 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms