RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 INTS8Q75QN2 995 aaKnown RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 MCM10Q7L590 875 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 FJX1Q86VR8 437 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPATA2LQ8IUW3 424 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 CHERPQ8IWX8 916 aaKnown RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZNF595Q8IYB9 648 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPATA6LQ8N4H0 392 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 OR7G3Q8NG95 312 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 PSMA8Q8TAA3 256 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TAS1R2Q8TE23 839 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 ROBO4Q8WZ75 1007 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 NEUROG1Q92886 237 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPSB1Q96BD6 273 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 LRRC3BQ96PB8 259 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 PKP4Q99569 1192 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SH3GL2Q99962 352 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 FZD8Q9H461 694 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TSPY26PQ9H489 355 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 CHMP1AQ9HD42 196 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TUFT1Q9NNX1 390 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 NOX4Q9NPH5 578 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 PRMT7Q9NVM4 692 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TBK1Q9UHD2 729 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SH3BGRL2Q9UJC5 107 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 RCOR1Q9UKL0 485 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 NESP48681 1621 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 RNF103-CHMP3A0A140T963 221 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 KANSL1LA0AUZ9 987 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 SMIM30A4D0T7 59 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 RNF103O00237 685 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 PLOD2O00469 737 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 CREG1O75629 220 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 PPP1R3DO95685 299 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 G6PDP11413 515 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 FCGR1AP12314 374 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 NR2F2P24468 414 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 SSTR2P30874 369 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 HOXC9P31274 260 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 SOAT1P35610 550 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 PDLIM4P50479 330 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 LUMP51884 338 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 ADARP55265 1226 aaKnown RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 KIAA1024LP59773 190 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 SEC61A1P61619 476 aaKnown RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 ST8SIA6P61647 398 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZXDBP98169 803 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 RPS6KA1Q15418 735 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 OASLQ15646 514 aaKnown RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 TOR1AIP1Q5JTV8 583 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 PAPPA-AS1Q5QFB9 102 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 ETFRF1Q6IPR1 90 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 METTL2BQ6P1Q9 378 aaKnown RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 KCTD9Q7L273 389 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 DET1Q7L5Y6 550 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 DZIP1Q86YF9 867 aaKnown RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 PGBD5Q8N414 524 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 SFRP1Q8N474 314 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 HDDC3Q8N4P3 179 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 DBF4BQ8NFT6 615 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 C9orf43Q8TAL5 461 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 WFIKKN2Q8TEU8 576 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZFAND2BQ8WV99 257 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 WASF1Q92558 559 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 DNASE1L2Q92874 299 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 METTL2AQ96IZ6 378 aaKnown RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 C16orf45Q96MC5 204 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 DDOQ99489 341 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 KATNB1Q9BVA0 655 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 TRIM7Q9C029 511 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 KRT23Q9C075 422 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 ABCG8Q9H221 673 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 HIPK2Q9H2X6 1198 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 GAREM1Q9H706 876 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 PPP1R3EQ9H7J1 279 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 C17orf75Q9HAS0 396 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 GPR108Q9NPR9 543 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 CD93Q9NPY3 652 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 EQTNQ9NQ60 294 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 CNGB3Q9NQW8 809 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 FETUBQ9UGM5 382 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 CPSF3Q9UKF6 684 aaKnown RBP4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 ITGA11Q9UKX5 1188 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 SNX7Q9UNH6 387 aa4.33□□□□□ -1.72
HMGB1P48-201ENST00000446155 SCRIBQ14160 1630 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF541Q9H0D2 1346 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 TRIM64CA6NLI5 447 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 LACTBL1A8MY62 500 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 PROB1E7EW31 1015 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 TRIM77I1YAP6 450 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 EIF3DO15371 548 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 SLC28A2O43868 658 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 VEGFDO43915 354 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 PRAMEF11O60813 436 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 SOCS5O75159 536 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 TOMM70O94826 608 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 DDHD2O94830 711 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 PRSS2P07478 247 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 UBA1P22314 1058 aaKnown RBP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 KCNJ1P48048 391 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms