RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 GOLGA8KD6RF30 607 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 GOLGA8TH3BQL2 631 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 GOLGA8MH3BSY2 632 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 PHF2O75151 1096 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 STK17BO94768 372 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 TMEM63AO94886 807 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 VAPBO95292 243 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 FOLR1P15328 257 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 ZNF28P17035 718 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 ACADLP28330 430 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 CCR7P32248 378 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 MAGEA6P43360 314 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 KPNA2P52292 529 aaKnown RBP14.35□□□□□ -0.11
USE1-202ENST00000445667 SARNPP82979 210 aaKnown RBP14.35□□□□□ -0.11
USE1-202ENST00000445667 RHDQ02161 417 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 SYTL3Q4VX76 610 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 AARS2Q5JTZ9 985 aaKnown RBP14.35□□□□□ -0.11
USE1-202ENST00000445667 CAND1Q86VP6 1230 aaKnown RBP14.35□□□□□ -0.11
USE1-202ENST00000445667 KRT222Q8N1A0 295 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 SIDT2Q8NBJ9 832 aaKnown RBP14.35□□□□□ -0.11
USE1-202ENST00000445667 OR5AR1Q8NGP9 310 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 UBXN4Q92575 508 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 SLC41A2Q96JW4 573 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 TRIM56Q9BRZ2 755 aaKnown RBP14.35□□□□□ -0.11
USE1-202ENST00000445667 MVB12BQ9H7P6 319 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 PYCARDQ9ULZ3 195 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 SOX13Q9UN79 622 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 ASF1AQ9Y294 204 aa14.35□□□□□ -0.11
USE1-202ENST00000445667 TLCD2A6NGC4 264 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 BTN3A3O00478 584 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 CES2O00748 559 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 ATXN7O15265 892 aaPredicted RBP14.34□□□□□ -0.11
USE1-202ENST00000445667 PRB1P04280 392 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 LIFP15018 202 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 ARNTP27540 789 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 TTPAP49638 278 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 ARL4DP49703 201 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 CYP4F2P78329 520 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 PRKAA1Q13131 559 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 TAF1BQ53T94 588 aaPredicted RBP14.34□□□□□ -0.11
USE1-202ENST00000445667 CASC4Q6P4E1 433 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 RASGRP3Q8IV61 690 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 VRK3Q8IV63 474 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 UNC5BQ8IZJ1 945 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 NLGN4XQ8N0W4 816 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 OTUD6BQ8N6M0 293 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 NLGN4YQ8NFZ3 816 aaPredicted RBP14.34□□□□□ -0.11
USE1-202ENST00000445667 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 TTC9Q92623 222 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 CD180Q99467 661 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 CARD6Q9BX69 1037 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 ULBP3Q9BZM4 244 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 TFB2MQ9H5Q4 396 aaKnown RBP14.34□□□□□ -0.11
USE1-202ENST00000445667 MRM3Q9HC36 420 aaKnown RBP14.34□□□□□ -0.11
USE1-202ENST00000445667 TMEM184BQ9Y519 407 aaPredicted RBP14.34□□□□□ -0.11
USE1-202ENST00000445667 PCDHGA4Q9Y5G9 962 aa14.34□□□□□ -0.11
USE1-202ENST00000445667 AHCTF1Q8WYP5 2266 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 LOC101059948A0A1B0GTJ6 334 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 GSAPA4D1B5 854 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 EIF4E1BA6NMX2 242 aaKnown RBP14.33□□□□□ -0.12
USE1-202ENST00000445667 F8W8V4 182 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 ERVH48-1M5A8F1 160 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 BTN3A1O00481 513 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 PRMT5O14744 637 aaPredicted RBP14.33□□□□□ -0.12
USE1-202ENST00000445667 NDUFS3O75489 264 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 SPAG6O75602 509 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 KIAA0754O94854 1291 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 DLGAP3O95886 979 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 EBLN1P0CF75 366 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 FGF5P12034 268 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 CDH3P22223 829 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 MAP4P27816 1152 aaKnown RBP14.33□□□□□ -0.12
USE1-202ENST00000445667 GNG11P61952 73 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 HSPA14Q0VDF9 509 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 IL11RAQ14626 422 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 PTRHD1Q6GMV3 140 aaKnown RBP14.33□□□□□ -0.12
USE1-202ENST00000445667 AMIGO1Q86WK6 493 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 ZSCAN1Q8NBB4 408 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 MCUQ8NE86 351 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 GRK7Q8WTQ7 553 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 DDX47Q9H0S4 455 aaKnown RBP14.33□□□□□ -0.12
USE1-202ENST00000445667 P2RY12Q9H244 342 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 CDYLQ9Y232 598 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 TDRKHQ9Y2W6 561 aaKnown RBP14.33□□□□□ -0.12
USE1-202ENST00000445667 IGSF10Q6WRI0 2623 aa14.33□□□□□ -0.12
USE1-202ENST00000445667 PIKFYVEQ9Y2I7 2098 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 SLC9B1P1A6NJY1 282 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 GPC4O75487 556 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 TIAF1O95411 115 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 TPBGLP0DKB5 382 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 TCP1P17987 556 aaKnown RBP14.32□□□□□ -0.12
USE1-202ENST00000445667 AOAHP28039 575 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 PRDX3P30048 256 aaKnown RBP14.32□□□□□ -0.12
USE1-202ENST00000445667 FNTAP49354 379 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 HSD11B2P80365 405 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 PLOD1Q02809 727 aaPredicted RBP14.32□□□□□ -0.12
USE1-202ENST00000445667 ABRQ12979 859 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 TUBB3Q13509 450 aa14.32□□□□□ -0.12
USE1-202ENST00000445667 LY6DQ14210 128 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms