RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 NAPRTQ6XQN6 538 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 TRMT10CQ7L0Y3 403 aaKnown RBP13.76□□□□□ -0.21
SSBP3-208ENST00000444533 TAOK1Q7L7X3 1001 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 RAB44Q7Z6P3 723 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-208ENST00000444533 ZNF761Q86XN6 746 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-208ENST00000444533 PLXDC1Q8IUK5 500 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 TBC1D21Q8IYX1 336 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 CHCHD4Q8N4Q1 142 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 PPM1NQ8N819 430 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-208ENST00000444533 CFAP61Q8NHU2 1237 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 FBF1Q8TES7 1133 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 NCSTNQ92542 709 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 TSPAN17Q96FV3 270 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 ATXN7L3BQ96GX2 97 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 ELMO2Q96JJ3 720 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 RMDN2Q96LZ7 410 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 CYTH2Q99418 400 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 KIR3DX1Q9H7L2 352 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 LATS2Q9NRM7 1088 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 VWA7Q9Y334 891 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 PIKFYVEQ9Y2I7 2098 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 IGHV1OR21-1A0A087WYE8 117 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 FAM159BA6NKW6 160 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 EIF3FO00303 357 aaPredicted RBP13.75□□□□□ -0.21
SSBP3-208ENST00000444533 GPC4O75487 556 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 ACSL3O95573 720 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 PROS1P07225 676 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 ADRB1P08588 477 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 SAT1P21673 171 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 MAP4P27816 1152 aaKnown RBP13.75□□□□□ -0.21
SSBP3-208ENST00000444533 SPRP35270 261 aaPredicted RBP13.75□□□□□ -0.21
SSBP3-208ENST00000444533 CCNFP41002 786 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 GPX6P59796 221 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 ABRQ12979 859 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 KLHL38Q2WGJ6 581 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 GRTP1Q5TC63 336 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 USP53Q70EK8 1073 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 TMPRSS7Q7RTY8 843 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 OOSP2Q86WS3 158 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 CACTIN-AS1Q8N1I8 211 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 SIDT2Q8NBJ9 832 aaKnown RBP13.75□□□□□ -0.21
SSBP3-208ENST00000444533 OR5K2Q8NHB8 316 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 LKAAEAR1Q8TD35 194 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 LCN9Q8WX39 176 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 ZDHHC12Q96GR4 267 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 NDNQ99608 321 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 GPR21Q99679 349 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 CDC42EP4Q9H3Q1 356 aaKnown RBP13.75□□□□□ -0.21
SSBP3-208ENST00000444533 SRMSQ9H3Y6 488 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 RHOJQ9H4E5 214 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 PLAC1Q9HBJ0 212 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 RABGEF1Q9UJ41 708 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 TDRKHQ9Y2W6 561 aaKnown RBP13.75□□□□□ -0.21
SSBP3-208ENST00000444533 DHRS7Q9Y394 339 aa13.75□□□□□ -0.21
SSBP3-208ENST00000444533 A0A087WUV0 522 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 FAM221BA6H8Z2 402 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 D6RAR5 112 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 MATN2O00339 956 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 NTN3O00634 580 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 B4GAT1O43505 415 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 HYAL3O43820 417 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 CATP04040 527 aaKnown RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 TUBBP07437 444 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 TNFRSF8P28908 595 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 PMS2P54278 862 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 INHBCP55103 352 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 FOXK2Q01167 660 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 UAP1Q16222 522 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 KBTBD12Q3ZCT8 623 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 ZNF658BQ4V348 819 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 PHF19Q5T6S3 580 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 HECTD2Q5U5R9 776 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 WDR74Q6RFH5 385 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 NEK10Q6ZWH5 1172 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 ZC3HC1Q86WB0 502 aaKnown RBP13.74□□□□□ -0.21
SSBP3-208ENST00000444533 DCUN1D3Q8IWE4 304 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 CNPY4Q8N129 248 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 MYO1HQ8N1T3 1032 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 LRRN4CLQ8ND94 238 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 PHC3Q8NDX5 983 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 CCDC77Q9BR77 488 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 HGH1Q9BTY7 390 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 RAB11FIP5Q9BXF6 653 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 TBC1D10AQ9BXI6 508 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 SYTL2Q9HCH5 934 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 NINJ2Q9NZG7 142 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 SLC17A6Q9P2U8 582 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 SLC24A2Q9UI40 661 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 ANGPTL2Q9UKU9 493 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 SLC39A10Q9ULF5 831 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
SSBP3-208ENST00000444533 FAM95CA0A1B0GW59 222 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 MAP3K7O43318 606 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 CSO75390 466 aaKnown RBP13.73□□□□□ -0.21
SSBP3-208ENST00000444533 INHBAP08476 426 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 TYRP1P17643 537 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 CD9P21926 228 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 ACADLP28330 430 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 CD1CP29017 333 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms