RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
SF1-210ENST00000443908 SYTL3Q4VX76 610 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 ACSBG2Q5FVE4 666 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 C16orf46Q6P387 395 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 ZYG11AQ6WRX3 759 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 RASGRP3Q8IV61 690 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 BEND7Q8N7W2 519 aaPredicted RBP13.17□□□□□ -0.3
SF1-210ENST00000443908 MFSD2AQ8NA29 543 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 RAB3IL1Q8TBN0 382 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 STAG3L4Q8TBR4 150 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 MGARPQ8TDB4 240 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 DNASE2BQ8WZ79 361 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 TMEM159Q96B96 161 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 SCYL1Q96KG9 808 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 ATOH8Q96SQ7 321 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 C12orf65Q9H3J6 166 aaKnown RBP13.17□□□□□ -0.3
SF1-210ENST00000443908 DPEP2Q9H4A9 486 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 FGF22Q9HCT0 170 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 COPG2Q9UBF2 871 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 GULP1Q9UBP9 304 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 TMCO1Q9UM00 188 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 CACNA1EQ15878 2313 aa13.17□□□□□ -0.3
SF1-210ENST00000443908 PRSS38A1L453 326 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SYCE1LA8MT33 242 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 MEI4A8MW99 385 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 G3V2L1 256 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 H0Y8X5 98 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 TK2O00142 265 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SH3BP5O60239 455 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 C8GP07360 202 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 BPGMP07738 259 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SBK3P0C264 359 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
SF1-210ENST00000443908 CPA3P15088 417 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 VCLP18206 1134 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 GLRBP48167 497 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 THOP1P52888 689 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PRKAA2P54646 552 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 RACK1P63244 317 aaKnown RBP13.16□□□□□ -0.3
SF1-210ENST00000443908 NFKB2Q00653 900 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 HSPA14Q0VDF9 509 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PCLAFQ15004 111 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PDK4Q16654 411 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 ZNF423Q2M1K9 1284 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PYCR3Q53H96 274 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 WDR45BQ5MNZ6 344 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
SF1-210ENST00000443908 CRTC3Q6UUV7 619 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 XKR5Q6UX68 686 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 CYHR1Q6ZMK1 362 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 RGS9BPQ6ZS82 235 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 Q6ZSR6 202 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PIWIL4Q7Z3Z4 852 aaKnown RBP13.16□□□□□ -0.3
SF1-210ENST00000443908 AMZ2Q86W34 360 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 GALNT13Q8IUC8 556 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 TRIM42Q8IWZ5 723 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SLC22A15Q8IZD6 547 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SPATA6LQ8N4H0 392 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 CCDC63Q8NA47 563 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 OR13H1Q8NG92 308 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 CKAP2Q8WWK9 683 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SNX19Q92543 992 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 PTERQ96BW5 349 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 CCDC126Q96EE4 140 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 CAMK1GQ96NX5 476 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 MIR1-1HGQ9H1L0 117 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SIRPGQ9P1W8 387 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 SUSD2Q9UGT4 822 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 ADAM21Q9UKJ8 722 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 CA5BQ9Y2D0 317 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 IGF2RP11717 2491 aa13.16□□□□□ -0.3
SF1-210ENST00000443908 ATRXP46100 2492 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 A0A1W2PR77 199 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 BTN3A1O00481 513 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 KLF11O14901 512 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 SLC16A5O15375 505 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 SHOX2O60902 331 aaPredicted RBP13.15□□□□□ -0.3
SF1-210ENST00000443908 H2AFYO75367 372 aaKnown RBP13.15□□□□□ -0.3
SF1-210ENST00000443908 ENO2P09104 434 aaPredicted RBP13.15□□□□□ -0.3
SF1-210ENST00000443908 MYL2P10916 166 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 CD59P13987 128 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 TAC1P20366 129 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 ATP5F1P24539 256 aaPredicted RBP13.15□□□□□ -0.3
SF1-210ENST00000443908 CLCNKAP51800 687 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 GYS2P54840 703 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 GUCY1A3Q02108 690 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 LRP8Q14114 963 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 OR4D1Q15615 310 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 TSNQ15631 228 aaKnown RBP13.15□□□□□ -0.3
SF1-210ENST00000443908 CDKL4Q5MAI5 379 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 C1orf216Q8TAB5 229 aa13.15□□□□□ -0.3
SF1-210ENST00000443908 SETD7Q8WTS6 366 aaKnown RBP13.15□□□□□ -0.3
SF1-210ENST00000443908 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms