RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CLDN24A6NM45 220 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 UROSP10746 265 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 DGKQP52824 942 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 GPR19Q15760 415 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 LRRC26Q2I0M4 334 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 GNASQ5JWF2 1037 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ZNF549Q6P9A3 640 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 LSM14AQ8ND56 463 aaKnown RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 WNT8BQ93098 351 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 C17orf62Q9BQA9 187 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 FABP12A6NFH5 140 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 I3L521 148 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 SUV39H1O43463 412 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 SBK3P0C264 359 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 MLLT3P42568 568 aaPredicted RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 GRIK2Q13002 908 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 LRRC66Q68CR7 880 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 NCBP2-AS2Q69YL0 99 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 GPR153Q6NV75 609 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ESRP1Q6NXG1 681 aaKnown RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 FAM196AQ6ZSG2 479 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ARMCX2Q7L311 632 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 RNF130Q86XS8 419 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 PTRH1Q86Y79 214 aaKnown RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 E5RI56 91 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 CAPN5O15484 640 aaPredicted RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 AP2A2O94973 939 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 S100A3P33764 101 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 CA5AP35218 305 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 PUS10Q3MIT2 529 aaKnown RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 C1orf127Q8N9H9 656 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 LPCAT1Q8NF37 534 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 PYURFQ96I23 114 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ANKRA2Q9H9E1 313 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ZNF490Q9ULM2 529 aaPredicted RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 A0A096LPI6 279 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 FPR1P21462 350 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 C21orf33P30042 268 aaPredicted RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 CAP2P40123 477 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 HCAR3P49019 387 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 FXNQ16595 210 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 AMHR2Q16671 573 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 TXNDC11Q6PKC3 985 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 TMEM151AQ8N4L1 468 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 PGLYRP2Q96PD5 576 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ACOXLQ9NUZ1 547 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 MTMR10Q9NXD2 777 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 PHF11Q9UIL8 331 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 IKZF3Q9UKT9 509 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 VPS9D1Q9Y2B5 631 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 GPR45Q9Y5Y3 372 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 TCRBV5S2A0A599 114 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 HNRNPCL2B2RXH8 293 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 H0YC42 278 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ETV1P50549 477 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ISL1P61371 349 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 CBX2Q14781 532 aaPredicted RBP4.94□□□□□ -1.62
HERC1-201ENST00000443617 METTL6Q8TCB7 284 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 MAGIXQ9H6Y5 334 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 CTDSP2O14595 271 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 SLC2A3P11169 496 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 TALDO1P37837 337 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ZNF284Q2VY69 593 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 TRNP1Q6NT89 227 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 FUNDC1Q8IVP5 155 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 MSANTD3Q96H12 275 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 TPD52L3Q96J77 140 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 ATXN3LQ9H3M9 355 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 SSR3Q9UNL2 185 aa4.94□□□□□ -1.62
HERC1-201ENST00000443617 GRXCR2A6NFK2 248 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 PCMT1P22061 227 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 SMARCB1Q12824 385 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 STXBP2Q15833 593 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 DEFB106AQ8N104 65 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 SLC37A3Q8NCC5 494 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 SPATA33Q96N06 139 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 MRM3Q9HC36 420 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 TNFRSF12AQ9NP84 129 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 NCKAP1Q9Y2A7 1128 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 METTL15A6NJ78 407 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 SMLR1H3BR10 107 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 F9P00740 461 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 ATXN1P54253 815 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 RCAN2Q14206 197 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 DPY19L1Q2PZI1 675 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 GLB1L3Q8NCI6 653 aaPredicted RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 TNIP3Q96KP6 325 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 ZNF222Q9UK12 451 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 SNX10Q9Y5X0 201 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 IRS2Q9Y4H2 1338 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 FHP07954 510 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 ERVK-8P63133 956 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 HSPA14Q0VDF9 509 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 CELF3Q5SZQ8 465 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 PPP1R26Q5T8A7 1209 aaPredicted RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 ARSKQ6UWY0 536 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 KCTD20Q7Z5Y7 419 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 SLC44A2Q8IWA5 706 aaPredicted RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 SMURF1Q9HCE7 757 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms