RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 ING4Q9UNL4 249 aa12.69□□□□□ -0.38
BRPF3-203ENST00000441123 GSAPA4D1B5 854 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 SCAMP3O14828 347 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 SLC22A1O15245 554 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 KDELR3O43731 214 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 ERAL1O75616 437 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 CLK3P49761 638 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 PSMD4P55036 377 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 SLC10A7Q0GE19 358 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 CES5AQ6NT32 575 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 USP43Q70EL4 1123 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 WDTC1Q8N5D0 677 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 FAM156AQ8NDB6 213 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 OR13C4Q8NGS5 318 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 MOCS1Q9NZB8 636 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 CPQQ9Y646 472 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 USP54Q70EL1 1684 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 ISM1B1AKI9 464 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 OR10H2O60403 315 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 GNAZP19086 355 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 GALK1P51570 392 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 NRLP54845 237 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 MTTPP55157 894 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 HFE2Q6ZVN8 426 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 CYP2U1Q7Z449 544 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 HDDC2Q7Z4H3 204 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 C9orf43Q8TAL5 461 aaPredicted RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 NLE1Q9NVX2 485 aaPredicted RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 MRPS33Q9Y291 106 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 N4BP2Q86UW6 1770 aaPredicted RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 IGKV6-21A0A0C4DH24 114 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 A0A1W2PP18 115 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 NFKB2Q00653 900 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 SCAPQ12770 1279 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 TRIM32Q13049 653 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 BIKQ13323 160 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 HEPACAMQ14CZ8 416 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 OXR1Q8N573 874 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 COL26A1Q96A83 441 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 CGREF1Q99674 301 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 NMUR1Q9HB89 426 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 PDLIM7Q9NR12 457 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 TRMT13Q9NUP7 481 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 SNX7Q9UNH6 387 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 C7P10643 843 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 VARSP26640 1264 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 STC1P52823 247 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 SP140Q13342 867 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 LARS2Q15031 903 aaKnown RBP12.68□□□□□ -0.38
BRPF3-203ENST00000441123 CARD16Q5EG05 197 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 TMEM198Q66K66 360 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 CACUL1Q86Y37 369 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 RFKQ969G6 155 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 TRIB3Q96RU7 358 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 DUSP26Q9BV47 211 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 RAB11FIP5Q9BXF6 653 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
BRPF3-203ENST00000441123 H0YJX3 145 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 IVDP26440 423 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ALDH4A1P30038 563 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ECT2LQ008S8 904 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ADAMTS15Q8TE58 950 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 GPATCH1Q9BRR8 931 aaKnown RBP12.67□□□□□ -0.38
BRPF3-203ENST00000441123 LMAN2LQ9H0V9 348 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 PCDHAC1Q9H158 963 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ING3Q9NXR8 418 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 DEC1Q9P2X7 70 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 SPATA2Q9UM82 520 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 NR2E3Q9Y5X4 410 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 WWP2O00308 870 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 PRAMEF11O60813 436 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 RPLP0P05388 317 aaKnown RBP12.67□□□□□ -0.38
BRPF3-203ENST00000441123 IDSP22304 550 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 DNAJA1P31689 397 aaKnown RBP12.67□□□□□ -0.38
BRPF3-203ENST00000441123 UGT1A5P35504 534 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ATP13A5Q4VNC0 1218 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ZNF678Q5SXM1 525 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 SAMD14Q8IZD0 417 aaPredicted RBP12.67□□□□□ -0.38
BRPF3-203ENST00000441123 LRRC17Q8N6Y2 441 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 TRPV3Q8NET8 790 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 SLC38A4Q969I6 547 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 AHCYL2Q96HN2 611 aaKnown RBP12.67□□□□□ -0.38
BRPF3-203ENST00000441123 TEPSINQ96N21 525 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 MIPEPQ99797 713 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 SYT11Q9BT88 431 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 TNKS2Q9H2K2 1166 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 SLC32A1Q9H598 525 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ANKHQ9HCJ1 492 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 MRTO4Q9UKD2 239 aaKnown RBP12.67□□□□□ -0.38
BRPF3-203ENST00000441123 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 UBE2QL1A1L167 161 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 AIREO43918 545 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 WBP4O75554 376 aaKnown RBP12.67□□□□□ -0.38
BRPF3-203ENST00000441123 MAPK12P53778 367 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 PTPN5P54829 565 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 SPIN4Q56A73 249 aa12.67□□□□□ -0.38
BRPF3-203ENST00000441123 B3GNT9Q6UX72 402 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms