RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 FAM234BA2RU67 622 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 AGAP5A6NIR3 686 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 PRMT5O14744 637 aaPredicted RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 ZNF623O75123 536 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 CNTN5O94779 1100 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 SIX3O95343 332 aaPredicted RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 ANGPTL1O95841 491 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 LHX1P48742 406 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 SEPHS1P49903 392 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 CDKN2DP55273 166 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 CHRNEQ04844 493 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 RFX4Q33E94 735 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 PRR23CQ6ZRP0 262 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 NECAB2Q7Z6G3 386 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 TMEM86AQ8N2M4 240 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 PROX1Q92786 737 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 CELF6Q96J87 481 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 CDK5RAP1Q96SZ6 601 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 KAT8Q9H7Z6 458 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 SMPD4Q9NXE4 827 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 IL37Q9NZH6 218 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 NPAP1Q9NZP6 1156 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 ZIM2Q9NZV7 527 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 PCDHGA3Q9Y5H0 932 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 SHROOM3Q8TF72 1996 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 LRRC14BA6NHZ5 514 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 CD1DP15813 335 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 PSMB9P28065 219 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 TUBA1BP68363 451 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 SLC35A2P78381 396 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 FPGSQ05932 587 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 PLEKHG6Q3KR16 790 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 ZNF404Q494X3 552 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 ANKRD34AQ69YU3 496 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 PNCKQ6P2M8 343 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 RANBP10Q6VN20 620 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 TUBA1AQ71U36 451 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 TMCO2Q7Z6W1 182 aaPredicted RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 CCDC103Q8IW40 242 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 HS3ST5Q8IZT8 346 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 ASCC1Q8N9N2 400 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 OR10T2Q8NGX3 314 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 OR5K1Q8NHB7 308 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 CNIH3Q8TBE1 160 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 ZHX1-C8orf76Q96EF9 292 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 NSUN5Q96P11 429 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 SMOQ99835 787 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 FSD1LQ9BXM9 530 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 EPS8L2Q9H6S3 715 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 GORASP2Q9H8Y8 452 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 CARS2Q9HA77 564 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 EXD2Q9NVH0 621 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 OPTCQ9UBM4 332 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 N6AMT1Q9Y5N5 214 aa11.7□□□□□ -0.54
LTBR-203ENST00000441074 MRPL42Q9Y6G3 142 aaKnown RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 COL4A4P53420 1690 aaPredicted RBP11.7□□□□□ -0.54
LTBR-203ENST00000441074 XIRP2A4UGR9 3374 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CLDN24A6NM45 220 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 NT5C1B-RDH14C9J2C7 533 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 GNGT2O14610 69 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 BCKDKO14874 412 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 FGF10O15520 208 aaPredicted RBP11.69□□□□□ -0.54
LTBR-203ENST00000441074 HS6ST1O60243 411 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 SNX2O60749 519 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 MRPS14O60783 128 aaKnown RBP11.69□□□□□ -0.54
LTBR-203ENST00000441074 ALX3O95076 343 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CYP11A1P05108 521 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 USP17L7P0C7H9 530 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 ITGAMP11215 1152 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CA8P35219 290 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 UGT2B10P36537 528 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CHRNA4P43681 627 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CXCR4P61073 352 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 IL5RAQ01344 420 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 MVKQ03426 396 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 PFKFB4Q16877 469 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 FAM26DQ5JW98 314 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 COLEC12Q5KU26 742 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 UBE2UQ5VVX9 321 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 AGAP6Q5VW22 663 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 IL31Q6EBC2 164 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 SPESP1Q6UW49 350 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 TMC5Q6UXY8 1006 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 DLEU7Q6UYE1 221 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 LRRC8DQ7L1W4 858 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 DEFB128Q7Z7B8 93 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 SLC43A3Q8NBI5 491 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 SETD9Q8NE22 299 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 IL17RDQ8NFM7 739 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 EXT2Q93063 718 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CCDC115Q96NT0 180 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 AGAP4Q96P64 663 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CCDC177Q9NQR7 707 aaPredicted RBP11.69□□□□□ -0.54
LTBR-203ENST00000441074 ZNF221Q9UK13 617 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 A3GALT2U3KPV4 340 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 METTL15A6NJ78 407 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 EVPLLA8MZ36 301 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms