RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PHF7Q9BWX1 381 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 GATA5Q9BWX5 397 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 ABCG8Q9H221 673 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 MTG2Q9H4K7 406 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 EPHX3Q9H6B9 360 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 ALG9Q9H6U8 611 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 UBE2ZQ9H832 354 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 ACTR5Q9H9F9 607 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 SARS2Q9NP81 518 aaKnown RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLCO1B3Q9NPD5 702 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZDHHC4Q9NPG8 344 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 SAR1AQ9NR31 198 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 MRGBPQ9NV56 204 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 NUDT4Q9NZJ9 180 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 CRIM1Q9NZV1 1036 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 HAO1Q9UJM8 370 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 SARDHQ9UL12 918 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 RNF112Q9ULX5 631 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 SORCS3Q9UPU3 1222 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 DNAJC16Q9Y2G8 782 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 STK38LQ9Y2H1 464 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 HIF3AQ9Y2N7 669 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 RAP2CQ9Y3L5 183 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 PIAS3Q9Y6X2 628 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 ATG2BQ96BY7 2078 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 COL4A3Q01955 1670 aa3.9□□□□□ -1.78
HMGB1P37-201ENST00000439613 LAMA3Q16787 3333 aa3.9□□□□□ -1.78
HMGB1P37-201ENST00000439613 A0A0G2JND7 137 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GOLGA8QA0A0J9YX86 632 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 A0A0U1RQS6 177 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GOLGA8OA6NCC3 632 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KLHL33A6NCF5 533 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PABPN1LA6NDY0 278 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 A8MT66 165 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 C2CD4DB7Z1M9 353 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GPR89AB7ZAQ6 455 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GOLGA8NF8WBI6 632 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 H3BQ06 376 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 STX16-NPEPL1H3BU86 382 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 BTN3A1O00481 513 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 MAN2B1O00754 1011 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 STX16O14662 325 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RAD51BO15315 384 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC16A5O15375 505 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 HDAC3O15379 428 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 MBTPS2O43462 519 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZBTB14O43829 449 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KLK8O60259 260 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SNX2O60749 519 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 HNRNPCL1O60812 293 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RNGTTO60942 597 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ATG13O75143 517 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RECQL5O94762 991 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC25A14O95258 325 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TRIM16O95361 564 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TSPAN12O95859 305 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 BPNT1O95861 308 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 DNTTP04053 509 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 C8GP07360 202 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ENO2P09104 434 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FURINP09958 794 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SBK3P0C264 359 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GPR89BP0CG08 455 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PRSS56P0CW18 603 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 MPC1LP0DKB6 136 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GFAPP14136 432 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ALOX15P16050 662 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KCNA5P22460 613 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SP100P23497 879 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 AOAHP28039 575 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TEAD1P28347 426 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ETV3P41162 512 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 P2RY2P41231 377 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KIR2DL1P43626 348 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RASSF2P50749 326 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RPL14P50914 215 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 AQP5P55064 265 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RPS14P62263 151 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 HERVK_113P63132 956 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RPS21P63220 83 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SATB1Q01826 763 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SEMG2Q02383 582 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PLOD1Q02809 727 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 MESP2Q0VG99 397 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CNTN1Q12860 1018 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 OVGP1Q12889 678 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SGCGQ13326 291 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SP140Q13342 867 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TDGQ13569 410 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GTF2H3Q13889 308 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 OR4D1Q15615 310 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SMAD2Q15796 467 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CST6Q15828 149 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RSPO4Q2I0M5 234 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TTC31Q49AM3 519 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 LACTB2Q53H82 288 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 C2orf27AQ580R0 203 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMEM196Q5HYL7 178 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 LRRC73Q5JTD7 316 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 EOGTQ5NDL2 527 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms