RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 POLG2Q9UHN1 485 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ADGRE2Q9UHX3 823 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 PKP3Q9Y446 797 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SPO11Q9Y5K1 396 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRIM64CA6NLI5 447 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 DFNA5O60443 496 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 AOC2O75106 756 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 CDK14O94921 469 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 S1PR4O95977 384 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 CSF2P04141 144 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SPNP16150 400 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC11A2P49281 568 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ALDH7A1P49419 539 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 HK2P52789 917 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RAB25P57735 213 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RHOAP61586 193 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RPL38P63173 70 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TUBA4AP68366 448 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 MXD1Q05195 221 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 DMC1Q14565 340 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 IHHQ14623 411 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 UGT3A2Q3SY77 523 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RUNDC3AQ59EK9 446 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TECRLQ5HYJ1 363 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ANKS6Q68DC2 871 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 BORAQ6PGQ7 559 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RBM23Q86U06 439 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RTN4RL1Q86UN2 441 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SPARTQ8N0X7 666 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 C17orf50Q8WW18 174 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 IRGQQ8WZA9 623 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 CDKN2AIPNLQ96HQ2 116 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 BTN2A3PQ96KV6 586 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZBTB20Q9HC78 741 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 CEP290O15078 2479 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ARID1AO14497 2285 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ANGPTL1O95841 491 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 RFC2P35250 354 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATP5C1P36542 298 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLK3P49761 638 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF846Q147U1 533 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 RTP2Q5QGT7 225 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 C17orf99Q6UX52 265 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 ISCA2Q86U28 154 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 RASAL3Q86YV0 1011 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRIM48Q8IWZ4 208 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLYBLQ8N0X4 340 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 CPSF7Q8N684 471 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 UTP15Q8TED0 518 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 ULK4Q96C45 1275 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 SH3GL1Q99961 368 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 COPS4Q9BT78 406 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 ASPSCR1Q9BZE9 553 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 AGPAT4Q9NRZ5 378 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 ERVK13-1Q9NX77 482 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 RNF186Q9NXI6 227 aa9.77□□□□□ -0.84
CDC42SE1-202ENST00000439374 AP3D1O14617 1153 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 NTRK1P04629 796 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 UGT2B4P06133 528 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CKBP12277 381 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 HOXD8P13378 290 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 EPHA2P29317 976 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CYP2C18P33260 490 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 GRK3P35626 688 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CCT8P50990 548 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CDH18Q13634 790 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 SNAP47Q5SQN1 464 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 SCML4Q8N228 414 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM151AQ8N4L1 468 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC22A17Q8WUG5 538 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 IMP4Q96G21 291 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 IL37Q9NZH6 218 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM181Q9P2C4 612 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 AGO1Q9UL18 857 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 TLR6Q9Y2C9 796 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 USP34Q70CQ2 3546 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 C16orf96A6NNT2 1141 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 PDZK1P1A8MUH7 402 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 K7ERQ8 282 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 NBNO60934 754 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CDH1P12830 882 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 BMP1P13497 986 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CORO1AP31146 461 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 RPL34P49207 117 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 HTR6P50406 440 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 NKX3-2P78367 333 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CTU2Q2VPK5 515 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM98BQ52LJ0 330 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 UNC50Q53HI1 259 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF773Q6PK81 442 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 RSPO2Q6UXX9 243 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC22A9Q8IVM8 553 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 DTWD1Q8N5C7 304 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 DTX3Q8N9I9 347 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 OR52B6Q8NGF0 335 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CHPT1Q8WUD6 406 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 EEF1AKMT1Q8WVE0 214 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CCDC126Q96EE4 140 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms