RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
LSM1P1-201ENST00000438629 TEX13DA0A0J9YY54 714 aaPredicted RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 A0A1W2PRQ8 180 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 ANKUB1A6NFN9 424 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 FAM72CH0Y354 149 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 XPNPEP2O43895 674 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 LMX1BO60663 402 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 GCNT3O95395 438 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 TRUB2O95900 331 aaKnown RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 DNTTP04053 509 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 OR2T7P0C7T2 308 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 GABRA5P31644 462 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 MTHFRP42898 656 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 CSE1LP55060 971 aaKnown RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 CDH13P55290 713 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 MBTD1Q05BQ5 628 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 RASA2Q15283 850 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 C9orf50Q5SZB4 431 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 ERMARDQ5T6L9 678 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 FAM72AQ5TYM5 149 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 FAM72DQ6L9T8 149 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 C19orf48Q6RUI8 117 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 CASC1Q6TDU7 716 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 FAM198BQ6UWH4 519 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 CAMKMTQ7Z624 323 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 NR2C2APQ86WQ0 139 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 FAM72BQ86X60 149 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 COMMD2Q86X83 199 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 MAML2Q8IZL2 1156 aaPredicted RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 CPSF7Q8N684 471 aaKnown RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 OR2AJ1Q8NGZ0 328 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 ZNF473Q8WTR7 871 aaKnown RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 ZNF653Q96CK0 615 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 CFAP57Q96MR6 1250 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 SERINC2Q96SA4 455 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 ABHD6Q9BV23 337 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 FNDC11Q9BVV2 318 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 TFB2MQ9H5Q4 396 aaKnown RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 NOL11Q9H8H0 719 aaKnown RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 EQTNQ9NQ60 294 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 ZFP57Q9NU63 452 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 CFDP1Q9UEE9 299 aaPredicted RBP3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 ZNF112Q9UJU3 913 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 OSGIN1Q9UJX0 560 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 SLC7A7Q9UM01 511 aa3.55□□□□□ -1.84
LSM1P1-201ENST00000438629 EDDM13A0A1B0GTR0 161 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 TRBC2A0A5B9 178 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 ZNF432O94892 652 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 RPN1P04843 607 aaKnown RBP3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 DANCRP0C864 163 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 MYBL1P10243 752 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 MSH3P20585 1137 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 MARK3P27448 753 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 PCGF2P35227 344 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 PTPRCAPQ14761 206 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 RBBP5Q15291 538 aaKnown RBP3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 KYNUQ16719 465 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 ALDH1L2Q3SY69 923 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 FAM76BQ5HYJ3 339 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 ARMC4Q5T2S8 1044 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 RNASEH2BQ5TBB1 312 aaKnown RBP3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 GRTP1Q5TC63 336 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 STPG1Q5TH74 334 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 SLC35E4Q6ICL7 350 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 TEX38Q6PEX7 206 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 SLC26A9Q7LBE3 791 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 ZNF554Q86TJ5 538 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 CUZD1Q86UP6 607 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 PLD3Q8IV08 490 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 DCUN1D3Q8IWE4 304 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 TC2NQ8N9U0 490 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 KBTBD3Q8NAB2 608 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 CCDC191Q8NCU4 936 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 CCDC107Q8WV48 283 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 PGAP3Q96FM1 320 aaPredicted RBP3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 CNDP2Q96KP4 475 aaKnown RBP3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 ZNF830Q96NB3 372 aaPredicted RBP3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 KRTAP1-5Q9BYS1 174 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 DPAGT1Q9H3H5 408 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 ANKZF1Q9H8Y5 726 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 ACKR4Q9NPB9 350 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 MBNL1Q9NR56 388 aaKnown RBP3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 OLAHQ9NV23 265 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 COQ3Q9NZJ6 369 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 RHCGQ9UBD6 479 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 SLC24A2Q9UI40 661 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 TCF19Q9Y242 345 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 SCN5AQ14524 2016 aa3.54□□□□□ -1.84
LSM1P1-201ENST00000438629 KAT6BQ8WYB5 2073 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 A0A1W2PRB8 838 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 PRR23D1E9PI22 279 aaPredicted RBP3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 RNASEH1O60930 286 aaKnown RBP3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 NR3C1P04150 777 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 PRR23D2P0DMB1 279 aaPredicted RBP3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 GNAZP19086 355 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 EEF1B2P24534 225 aaKnown RBP3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 RAB28P51157 221 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 PNRC1Q12796 327 aaPredicted RBP3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 PRKAA1Q13131 559 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 IL11RAQ14626 422 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms