RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PBX3P40426 434 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 PIP4K2AP48426 406 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 SNX16P57768 344 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 ZBED6P86452 979 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 AIMP2Q13155 320 aaKnown RBP2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 CRYMQ14894 314 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 MEA1Q16626 185 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 ALG11Q2TAA5 492 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 SOWAHCQ53LP3 525 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 ITPRIPL1Q6GPH6 555 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 CFAP161Q6P656 301 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 TSSK4Q6SA08 328 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 CYP20A1Q6UW02 462 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 HACE1Q8IYU2 909 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 FBXL16Q8N461 479 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 PDILTQ8N807 584 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 ZNF611Q8N823 705 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 KCNG4Q8TDN1 519 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 IGSF8Q969P0 613 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 MMABQ96EY8 250 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 PERPQ96FX8 193 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 TMEM68Q96MH6 324 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 SLX1AQ9BQ83 275 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 SIL1Q9H173 461 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 SH2D4AQ9H788 454 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 DNAJB4Q9UDY4 337 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 MKLN1Q9UL63 735 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 MTMR6Q9Y217 621 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 ADAMTS9Q9P2N4 1935 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 KIDINS220Q9ULH0 1771 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 MYO5CQ9NQX4 1742 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 CDC42BPBQ9Y5S2 1711 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 VWDEQ8N2E2 1590 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 IQSEC2Q5JU85 1478 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 RAPGEF2Q9Y4G8 1499 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 UHRF1BP1Q6BDS2 1440 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 POGZQ7Z3K3 1410 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 C15orf62A8K5M9 175 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 A8MZ25 164 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 MYO1GB0I1T2 1018 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 HCRTR2O43614 444 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 PI15O43692 258 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 NDUFS3O75489 264 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 ZNF182P17025 639 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 BDNFP23560 247 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 HOXD13P35453 343 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 TFAP4Q01664 338 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 PEX6Q13608 980 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 ADIPOQQ15848 244 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 CXorf66Q5JRM2 361 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 FAM205BPQ63HN1 556 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 Q6ZSR9 355 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 IKBIPQ70UQ0 350 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 TICAM1Q8IUC6 712 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 TMEM143Q96AN5 459 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 NSUN4Q96CB9 384 aaKnown RBP2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 GIMAP5Q96F15 307 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 PGAM5Q96HS1 289 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 FOXN4Q96NZ1 517 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 SMC6Q96SB8 1091 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 SYT15Q9BQS2 421 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 CCDC68Q9H2F9 335 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 SEPT11Q9NVA2 429 aaKnown RBP2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 TERF2IPQ9NYB0 399 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 OR14J1Q9UGF5 321 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 VPS28Q9UK41 221 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 GPR34Q9UPC5 381 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 ITSN2Q9NZM3 1697 aa2.79□□□□□ -1.96
HMGB1P31-201ENST00000437242 KDM5CP41229 1560 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 CFAP74Q9C0B2 1584 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 PCNX3Q9H6A9 2034 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 C9orf84Q5VXU9 1444 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 IGHV4-4A0A075B6R2 117 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 FAM237AA0A1B0GTK4 181 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 FAM237BA0A1B0GVD1 139 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 A6NCN8 305 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 EIF4E1BA6NMX2 242 aaKnown RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 CDRT15L2A8MXV6 281 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 AP3D1O14617 1153 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 DOK2O60496 412 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 DAB1O75553 588 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 SLC25A12O75746 678 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 TSPAN9O75954 239 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 NGFP01138 241 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 EPHA2P29317 976 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 MAPK4P31152 587 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 PPARGP37231 505 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 FRG1Q14331 258 aaKnown RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 MED22Q15528 200 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 PCGF3Q3KNV8 242 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 PLEKHS1Q5SXH7 462 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 NDUFAF5Q5TEU4 345 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 JADE1Q6IE81 842 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 KLHL35Q6PF15 583 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 GLDNQ6ZMI3 551 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 ATG9AQ7Z3C6 839 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 PM20D2Q8IYS1 436 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 RNF168Q8IYW5 571 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms