RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 FAM228BP0C875 321 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 ITGA3P26006 1051 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 HADHAP40939 763 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 WNT3AP56704 352 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 DYNLT1P63172 113 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 PDK1Q15118 436 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 DEFB110Q30KQ9 67 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 GLT6D1Q7Z4J2 308 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 FJX1Q86VR8 437 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 PHC3Q8NDX5 983 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 OR2L2Q8NH16 312 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 GRHL3Q8TE85 626 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 N4BP2L2Q92802 583 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-213ENST00000436675 NAP1L5Q96NT1 182 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-213ENST00000436675 IP6K3Q96PC2 410 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 TRAPPC9Q96Q05 1148 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 DPH2Q9BQC3 489 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-213ENST00000436675 DHRS4Q9BTZ2 278 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 SPRTNQ9H040 489 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-213ENST00000436675 XKR8Q9H6D3 395 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 SYTL2Q9HCH5 934 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 NDOR1Q9UHB4 597 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 NOVA2Q9UNW9 492 aaKnown RBP14.35□□□□□ -0.11
HDAC8-213ENST00000436675 PCM1Q15154 2024 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 CSMD2Q7Z408 3487 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 E2F3O00716 465 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 APOL1O14791 398 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 PPP1R12AO14974 1030 aaPredicted RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 CNOT3O75175 753 aaKnown RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 IPO13O94829 963 aaKnown RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 CTSBP07858 339 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 HBQ1P09105 142 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 NDUFS1P28331 727 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 ITGA9Q13797 1035 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 CYP2A13Q16696 494 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 TEX44Q53QW1 395 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 ZDHHC20Q5W0Z9 365 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 ALKBH5Q6P6C2 394 aaKnown RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 KDELC1Q6UW63 502 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 PPP1R32Q7Z5V6 425 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 TRIM73Q86UV7 250 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 RFX6Q8HWS3 928 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 GPR135Q8IZ08 494 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 ACVR1CQ8NER5 493 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 ZNF398Q8TD17 642 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 CNDP1Q96KN2 507 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 GBP5Q96PP8 586 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 WDR77Q9BQA1 342 aaPredicted RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 MAK16Q9BXY0 300 aaKnown RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 TRABDQ9H4I3 376 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 ATP13A2Q9NQ11 1180 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 IGSF5Q9NSI5 407 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 IFT80Q9P2H3 777 aaPredicted RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 DHCR7Q9UBM7 475 aaKnown RBP14.34□□□□□ -0.11
HDAC8-213ENST00000436675 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 PKP3Q9Y446 797 aa14.34□□□□□ -0.11
HDAC8-213ENST00000436675 HCRTR1O43613 425 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 KLHL41O60662 606 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 OR2B3O76000 313 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 IGHEP01854 428 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 SNRPB2P08579 225 aaKnown RBP14.33□□□□□ -0.12
HDAC8-213ENST00000436675 NFKB1P19838 968 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 PTPN3P26045 913 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 CD68P34810 354 aaPredicted RBP14.33□□□□□ -0.12
HDAC8-213ENST00000436675 PRKG2Q13237 762 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 SLC14A2Q15849 920 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 SLC9A4Q6AI14 798 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 ZC3H18Q86VM9 953 aaKnown RBP14.33□□□□□ -0.12
HDAC8-213ENST00000436675 DNAJB14Q8TBM8 379 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 CPLX3Q8WVH0 158 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 RBM41Q96IZ5 413 aaKnown RBP14.33□□□□□ -0.12
HDAC8-213ENST00000436675 OLFM3Q96PB7 478 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 FAM60AQ9NP50 221 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 IRAK4Q9NWZ3 460 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 HEBP2Q9Y5Z4 205 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 PCNX1Q96RV3 2341 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 MED13LQ71F56 2210 aa14.33□□□□□ -0.12
HDAC8-213ENST00000436675 NF1P21359 2839 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 LOC285095A0A1B0GVY8 99 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 CCDC66A2RUB6 948 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 MATN2O00339 956 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 STX7O15400 261 aaKnown RBP14.32□□□□□ -0.12
HDAC8-213ENST00000436675 PRAMEF1O95521 474 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 SERPING1P05155 500 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 TNNT3P45378 269 aaPredicted RBP14.32□□□□□ -0.12
HDAC8-213ENST00000436675 CDC16Q13042 620 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 MESDQ14696 234 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 HOOK3Q86VS8 718 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 ZNF655Q8N720 491 aaPredicted RBP14.32□□□□□ -0.12
HDAC8-213ENST00000436675 IPMKQ8NFU5 416 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 OR2Y1Q8NGV0 311 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 DTX3LQ8TDB6 740 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 PTERQ96BW5 349 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 TEKT5Q96M29 485 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 HGH1Q9BTY7 390 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 PITPNM3Q9BZ71 974 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 ASB8Q9H765 288 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 ACTR10Q9NZ32 417 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDAC8-213ENST00000436675 SAE1Q9UBE0 346 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms