RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 GCNT7Q6ZNI0 430 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 C20orf204Q6ZNR8 217 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 BMP8AQ7Z5Y6 402 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 MTERF4Q7Z6M4 381 aaKnown RBP6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 WDR5BQ86VZ2 330 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 ZNF547Q8IVP9 402 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 C1orf210Q8IVY1 113 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 CENPLQ8N0S6 344 aaPredicted RBP6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 LILRB2Q8N423 598 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM151AQ8N4L1 468 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 ZSCAN1Q8NBB4 408 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 DENND6BQ8NEG7 585 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 CADM4Q8NFZ8 388 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 TCP10LQ8TDR4 215 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 NUDT8Q8WV74 236 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 INPP5DQ92835 1189 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 NXNL1Q96CM4 212 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 CABS1Q96KC9 395 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 SELENOSQ9BQE4 189 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 PCED1AQ9H1Q7 454 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 OR2AG1Q9H205 316 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 WDR26Q9H7D7 661 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 SARS2Q9NP81 518 aaKnown RBP6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 SPATS2LQ9NUQ6 558 aaKnown RBP6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM216Q9P0N5 145 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC17A7Q9P2U7 560 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 GULP1Q9UBP9 304 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 DCDC2Q9UHG0 476 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 IKZF3Q9UKT9 509 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 SMG5Q9UPR3 1016 aaKnown RBP6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 DMTF1Q9Y222 760 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 RUVBL2Q9Y230 463 aaKnown RBP6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC17A4Q9Y2C5 497 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 ANKRD6Q9Y2G4 727 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 PLLPQ9Y342 182 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 HS3ST3A1Q9Y663 406 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 MYLKQ15746 1914 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 CKAP5Q14008 2032 aa6.91□□□□□ -1.3
LSM3P3-201ENST00000436601 SPTBN5Q9NRC6 3674 aaKnown RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 TARM1B6A8C7 271 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 E5RI56 91 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 LAMTOR5O43504 91 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 NUAK1O60285 661 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PLIN3O60664 434 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 GLRA3O75311 464 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 POP7O75817 140 aaKnown RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 KLHL2O95198 593 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 ZWINTO95229 277 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 ASMTLO95671 621 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PROCP04070 461 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 GSTA1P08263 222 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 LTA4HP09960 611 aaKnown RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 SBK3P0C264 359 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CD1DP15813 335 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CHN1P15882 459 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 NUDT1P36639 197 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 ETV4P43268 484 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 KCNC1P48547 511 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PRLHRP49683 370 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 KIAA1024LP59773 190 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CSTF1Q05048 431 aaKnown RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 SRSF5Q13243 272 aaKnown RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CSHL1Q14406 222 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 GBX1Q14549 363 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 INSCQ1MX18 579 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 TAF1BQ53T94 588 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 ACSBG2Q5FVE4 666 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 N4BP2L1Q5TBK1 243 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 UGT3A1Q6NUS8 523 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CRTC3Q6UUV7 619 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC36A4Q6YBV0 504 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CYHR1Q6ZMK1 362 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 Q6ZSR6 202 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CCDC91Q7Z6B0 441 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 ABI3BPQ7Z7G0 1075 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 C11orf96Q7Z7L8 435 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 LCA5Q86VQ0 697 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 LONP2Q86WA8 852 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CPNE9Q8IYJ1 553 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEFF1Q8IYR6 380 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 FBXL6Q8N531 539 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 ZBTB2Q8N680 514 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 LILRA3Q8N6C8 439 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 ANKRD42Q8N9B4 389 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 DTWD2Q8NBA8 298 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM76AQ8TAV0 307 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 THAP3Q8WTV1 239 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 EEF1AKMT1Q8WVE0 214 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PLPPR2Q96GM1 343 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 SCARF2Q96GP6 870 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 LINC00615Q96LM1 132 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM111AQ96PZ2 611 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PANX3Q96QZ0 392 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CCM2Q9BSQ5 444 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM126AQ9BYI3 521 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 UNKQ9C0B0 810 aaKnown RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 SYTL2Q9HCH5 934 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 MLXIPLQ9NP71 852 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PHPT1Q9NRX4 125 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms