RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DARS2Q6PI48 645 aaKnown RBP7.56□□□□□ -1.2
VPS50-203ENST00000436177 FAM83HQ6ZRV2 1179 aaPredicted RBP7.56□□□□□ -1.2
VPS50-203ENST00000436177 BBS12Q6ZW61 710 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
VPS50-203ENST00000436177 TMEM135Q86UB9 458 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 APLFQ8IW19 511 aaPredicted RBP7.56□□□□□ -1.2
VPS50-203ENST00000436177 D2HGDHQ8N465 521 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 ACVR1CQ8NER5 493 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 OR2L2Q8NH16 312 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 ZFPM2Q8WW38 1151 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 ALS2CR12Q96Q35 445 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 COPS8Q99627 209 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 APOL2Q9BQE5 337 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 HEMGNQ9BXL5 484 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 TLR10Q9BXR5 811 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 SLC29A3Q9BZD2 475 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 TSPY26PQ9H489 355 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 KCND1Q9NSA2 647 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 FKBPLQ9UIM3 349 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 PADI2Q9Y2J8 665 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 AAR2Q9Y312 384 aaKnown RBP7.56□□□□□ -1.2
VPS50-203ENST00000436177 ALG6Q9Y672 507 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 ARL5AQ9Y689 179 aa7.56□□□□□ -1.2
VPS50-203ENST00000436177 ZFC3H1O60293 1989 aaKnown RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 CCDC66A2RUB6 948 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 FIGNL2A6NMB9 653 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 TMEM150CB9EJG8 249 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 KCNN4O15554 427 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 DNAJB5O75953 348 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 SRP72O76094 671 aaKnown RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 AGTP01019 485 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 CYLC1P35663 651 aaPredicted RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 CCL11P51671 97 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 RRADP55042 308 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 EIF3EP60228 445 aaKnown RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 RPS18P62269 152 aaKnown RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 SRSF1Q07955 248 aaKnown RBP eCLIP7.55□□□□□ -1.2
VPS50-203ENST00000436177 ADCY2Q08462 1091 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 CHAF1BQ13112 559 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 SEMA5AQ13591 1074 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 TCEAL1Q15170 157 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 TAZQ16635 292 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 FAM199XQ6PEV8 388 aaPredicted RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 SARM1Q6SZW1 724 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 ARHGEF18Q6ZSZ5 1173 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 TAS2R42Q7RTR8 314 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 RAB43Q86YS6 212 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 CFAP206Q8IYR0 622 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 GPR135Q8IZ08 494 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 OR4E2Q8NGC2 313 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 OR4K2Q8NGD2 314 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 MIB2Q96AX9 1013 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 RMDN2Q96LZ7 410 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 INSM2Q96T92 566 aaPredicted RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 C17orf62Q9BQA9 187 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 ING2Q9H160 280 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 CHST8Q9H2A9 424 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 GOLPH3Q9H4A6 298 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 ACTR5Q9H9F9 607 aaPredicted RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 SYTL2Q9HCH5 934 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 LATS2Q9NRM7 1088 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 C1GALT1Q9NS00 363 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 IRAK4Q9NWZ3 460 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 SEMA5BQ9P283 1151 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 SERTAD3Q9UJW9 196 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 POMT2Q9UKY4 750 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 FARSAQ9Y285 508 aaKnown RBP7.55□□□□□ -1.2
VPS50-203ENST00000436177 ZNF451Q9Y4E5 1061 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 TEX15Q9BXT5 2789 aa7.55□□□□□ -1.2
VPS50-203ENST00000436177 GOLGA6L9A6NEM1 432 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 SLC9B1P1A6NJY1 282 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 C2orf74A8MZ97 194 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 F8W8V4 182 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 MEN1O00255 615 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 PJA2O43164 708 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 KDM1AO60341 852 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 DPM1O60762 260 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 TJP3O95049 919 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 GAS8O95995 478 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 ALPPP05187 535 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 HBQ1P09105 142 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 FURINP09958 794 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 RBP3P10745 1247 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 AGXTP21549 392 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 PSMB4P28070 264 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 RBL1P28749 1068 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 MARCKSL1P49006 195 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 PRLHRP49683 370 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 KPNA2P52292 529 aaKnown RBP7.54□□□□□ -1.2
VPS50-203ENST00000436177 HADHBP55084 474 aaKnown RBP7.54□□□□□ -1.2
VPS50-203ENST00000436177 ITGA1P56199 1179 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 TMPRSS15P98073 1019 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 GPS2Q13227 327 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 IL10RAQ13651 578 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 PTPRCAPQ14761 206 aa7.54□□□□□ -1.2
VPS50-203ENST00000436177 KYNUQ16719 465 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms