RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DNM1LO00429 736 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 CLDN4O14493 209 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 WDR46O15213 610 aaKnown RBP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 EIF3DO15371 548 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 IPO8O15397 1037 aaKnown RBP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNHIT1O43257 154 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 TSPAN1O60635 241 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 DIAPH2O60879 1101 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 WDR1O75083 606 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 TGDSO95455 350 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 IGHV2-70P01814 119 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 GBAP04062 536 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 FCGR1AP12314 374 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 CSF2RAP15509 400 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 TCF4P15884 667 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF23P17027 643 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 CD22P20273 847 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 TCEA1P23193 301 aaKnown RBP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 PSMA3P25788 255 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 PTPN3P26045 913 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ATP5DP30049 168 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 CCKBRP32239 447 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 LHX1P48742 406 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF75DP51815 510 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 CD81P60033 236 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ISL1P61371 349 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ILF3Q12906 894 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ITGA7Q13683 1181 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 KIR2DS5Q14953 304 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 E2F5Q15329 346 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF549Q6P9A3 640 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 PET117Q6UWS5 81 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 NHLRC1Q6VVB1 395 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 RAD9BQ6WBX8 426 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMPRSS11FQ6ZWK6 438 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ADCK2Q7Z695 626 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 RBM23Q86U06 439 aaKnown RBP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 CPSF7Q8N684 471 aaKnown RBP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 L3MBTL4Q8NA19 623 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 FIBINQ8TAL6 211 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 GDAP1Q8TB36 358 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 SETD6Q8TBK2 473 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 GRAPLQ8TC17 118 aaPredicted RBP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZFAND2BQ8WV99 257 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMEM19Q96HH6 336 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 GBP5Q96PP8 586 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 OR1F2PQ96R84 312 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 NEURL2Q9BR09 285 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 VN1R1Q9GZP7 353 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 TBC1D17Q9HA65 648 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 LMAN1LQ9HAT1 526 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 GRPEL1Q9HAV7 217 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 ACKR4Q9NPB9 350 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 OCIAD1Q9NX40 245 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 LIPT1Q9Y234 373 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 PRG4Q92954 1404 aaPredicted RBP3□□□□□ -1.93
HMGB1P27-201ENST00000431429 HEG1Q9ULI3 1381 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 CHD1O14646 1710 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 POLA1P09884 1462 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 ELOVL7A1L3X0 281 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 IFIT3O14879 490 aaKnown RBP2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PDE9AO76083 593 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM58BPP0C7Q3 252 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 POLR2CP19387 275 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 HSPA4P34932 840 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 AHRP35869 848 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 MATR3P43243 847 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLC9A3P48764 834 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PDLIM4P50479 330 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 BMXP51813 675 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 RPL24P83731 157 aaKnown RBP2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PLIN5Q00G26 463 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 GTF2H2Q13888 395 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 HLFQ16534 295 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 AWAT2Q6E213 333 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 GTF2H2CQ6P1K8 395 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 C15orf39Q6ZRI6 1047 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 MSANTD1Q6ZTZ1 278 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PLEKHM3Q6ZWE6 761 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 DET1Q7L5Y6 550 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PIWIL3Q7Z3Z3 882 aaKnown RBP2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 DSG4Q86SJ6 1040 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMPRSS11BQ86T26 416 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 KMT5CQ86Y97 462 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PTOV1Q86YD1 416 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 MFN1Q8IWA4 741 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 TIGD4Q8IY51 512 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 TTC30BQ8N4P2 665 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 GBGT1Q8N5D6 347 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 IQCF1Q8N6M8 205 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 BMPERQ8N8U9 685 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF441Q8N8Z8 693 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 FGFBP3Q8TAT2 258 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PPP4R1Q8TF05 950 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMED6Q8WW62 240 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 FIG4Q92562 907 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 DAZLQ92904 295 aaKnown RBP2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 PTP4A1Q93096 173 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 ATP6V1E2Q96A05 226 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 DHX58Q96C10 678 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms