RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 SNX20Q7Z614 316 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 PHC3Q8NDX5 983 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 ZFPM2Q8WW38 1151 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 DNAJC1Q96KC8 554 aaKnown RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 LINC00615Q96LM1 132 aaPredicted RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 SPATA13Q96N96 652 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 CCM2Q9BSQ5 444 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 MFRPQ9BY79 579 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 ACTR5Q9H9F9 607 aaPredicted RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 MAP10Q9P2G4 905 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 CCDC78A2IDD5 438 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 A6NL46 340 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 BTN3A1O00481 513 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 TMEM63AO94886 807 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 AGFG2O95081 481 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 ATP1B2P14415 290 aaPredicted RBP13.5□□□□□ -0.25
SEC13-211ENST00000431352 PDHA2P29803 388 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 PRDX3P30048 256 aaKnown RBP13.5□□□□□ -0.25
SEC13-211ENST00000431352 CTNNA1P35221 906 aaKnown RBP13.5□□□□□ -0.25
SEC13-211ENST00000431352 PRKG2Q13237 762 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 RAPSNQ13702 412 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 PRR30Q53SZ7 412 aaPredicted RBP13.5□□□□□ -0.25
SEC13-211ENST00000431352 PLEKHS1Q5SXH7 462 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 IZUMO3Q5VZ72 239 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 TAS2R42Q7RTR8 314 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 TRIM73Q86UV7 250 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 SYTL1Q8IYJ3 562 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 DSELQ8IZU8 1212 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 CARFQ8N187 725 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 TC2NQ8N9U0 490 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 OR52E1Q8NGJ3 308 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 OSBPL8Q9BZF1 889 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 LRRC4CQ9HCJ2 640 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 LUC7LQ9NQ29 371 aaKnown RBP13.5□□□□□ -0.25
SEC13-211ENST00000431352 LATS2Q9NRM7 1088 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 C1GALT1Q9NS00 363 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 PCMTD2Q9NV79 361 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 PIH1D1Q9NWS0 290 aaKnown RBP13.5□□□□□ -0.25
SEC13-211ENST00000431352 TCFL5Q9UL49 500 aa13.5□□□□□ -0.25
SEC13-211ENST00000431352 UTP20O75691 2785 aaKnown RBP13.49□□□□□ -0.25
SEC13-211ENST00000431352 MATN2O00339 956 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 ZNF185O15231 689 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 MAP3K7O43318 606 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
SEC13-211ENST00000431352 RORAP35398 523 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 CYLC1P35663 651 aaPredicted RBP13.49□□□□□ -0.25
SEC13-211ENST00000431352 HADHAP40939 763 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 COPS2P61201 443 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 ATP1A4Q13733 1029 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 DEFB110Q30KQ9 67 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 ZNF789Q5FWF6 425 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 HIST2H2BCQ6DN03 193 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 ZNF517Q6ZMY9 492 aaPredicted RBP13.49□□□□□ -0.25
SEC13-211ENST00000431352 SERPINA9Q86WD7 417 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 TAB3Q8N5C8 712 aaPredicted RBP13.49□□□□□ -0.25
SEC13-211ENST00000431352 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 ADAMTS17Q8TE56 1095 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 LRFN5Q96NI6 719 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 PSMG3-AS1Q96PY0 264 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 NLNQ9BYT8 704 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 TRIM5Q9C035 493 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 OR52A5Q9H2C5 316 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 VPS37BQ9H9H4 285 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 ZDHHC3Q9NYG2 299 aa13.49□□□□□ -0.25
SEC13-211ENST00000431352 PCDHGA9Q9Y5G4 932 aaKnown RBP13.49□□□□□ -0.25
SEC13-211ENST00000431352 RP1L1Q8IWN7 2480 aaPredicted RBP13.48□□□□□ -0.25
SEC13-211ENST00000431352 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 SOWAHDA6NJG2 315 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 AGAP14A8MT82 685 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 C9J4A7 227 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 E7EQ34 232 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 LDB2O43679 373 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 RAB40ALP0C0E4 278 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 TPH1P17752 444 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 ACRV1P26436 265 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 OTX2P32243 289 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 ITGA1P56199 1179 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 MSLNQ13421 630 aaPredicted RBP13.48□□□□□ -0.25
SEC13-211ENST00000431352 POU6F1Q14863 301 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 BRD3Q15059 726 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 NCF4Q15080 339 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 KYNUQ16719 465 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
SEC13-211ENST00000431352 C1orf189Q5VU69 101 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 DENND5AQ6IQ26 1287 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 SARM1Q6SZW1 724 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 ARHGEF18Q6ZSZ5 1173 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 CDHR3Q6ZTQ4 885 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 HOOK3Q86VS8 718 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 AMIGO1Q86WK6 493 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 GALNT11Q8NCW6 608 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 FDCSPQ8NFU4 85 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 HEXDCQ8WVB3 486 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 N4BP2L2Q92802 583 aaPredicted RBP13.48□□□□□ -0.25
SEC13-211ENST00000431352 LRRC45Q96CN5 670 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 TRAPPC9Q96Q05 1148 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 NUDT9Q9BW91 350 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 ACTR10Q9NZ32 417 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 G3BP2Q9UN86 482 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms