RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 BCL9O00512 1426 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 TRPM1Q7Z4N2 1603 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 E7EQ34 232 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 NFKBIEO00221 500 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 CYP3A5P20815 502 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 SNU13P55769 128 aaKnown RBP13.12□□□□□ -0.31
CDK12-201ENST00000430627 PGBD2Q6P3X8 592 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 RAB11FIP2Q7L804 512 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 SPATA13Q96N96 652 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 SUV39H2Q9H5I1 410 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 RBPJLQ9UBG7 517 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
CDK12-201ENST00000430627 A0A1W2PQ72 361 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 C2orf74A8MZ97 194 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 TSPAN9O75954 239 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 DNAJA1P31689 397 aaKnown RBP13.12□□□□□ -0.31
CDK12-201ENST00000430627 AP1S1P61966 158 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 SIM1P81133 766 aaPredicted RBP13.12□□□□□ -0.31
CDK12-201ENST00000430627 SPATC1Q76KD6 591 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
CDK12-201ENST00000430627 WDR53Q7Z5U6 358 aaPredicted RBP13.12□□□□□ -0.31
CDK12-201ENST00000430627 CMKLR1Q99788 373 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 ERP44Q9BS26 406 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 CCSER2Q9H7U1 834 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 ADGRA3Q8IWK6 1321 aa13.12□□□□□ -0.31
CDK12-201ENST00000430627 ERI3O43414 337 aaKnown RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 VIPR2P41587 438 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 STAT5AP42229 794 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 LMAN2Q12907 356 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 AUHQ13825 339 aaKnown RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 CDKN3Q16667 212 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 CXorf57Q6NSI4 855 aaKnown RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 PLXDC1Q8IUK5 500 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 TAC3Q9UHF0 121 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 PAK4O96013 591 aaPredicted RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 CRYBA1P05813 215 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 ANXA4P09525 319 aaPredicted RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 TSSK3Q96PN8 268 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 RTP3Q9BQQ7 232 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 ASPNQ9BXN1 380 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 XPR1Q9UBH6 696 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 PCDHB1Q9Y5F3 818 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 CROCC2H7BZ55 1655 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 A0A1W2PPW3 197 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 POLR1CO15160 346 aaPredicted RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 KDELR1P24390 212 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 ADRA1DP25100 572 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 ZZZ3Q8IYH5 903 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 WDR92Q96MX6 357 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 TSC22D3Q99576 134 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 COMMD4Q9H0A8 199 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 DAPK2Q9UIK4 370 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 PNMA8CA0A1B0GUJ8 204 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 PTGES3LE9PB15 166 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 H3BSH0 61 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 RHOQP17081 205 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 UNC5AQ6ZN44 842 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 DHFR2Q86XF0 187 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 EPS8L3Q8TE67 593 aaKnown RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 PTCHD1Q96NR3 888 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 C17orf62Q9BQA9 187 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 FN3KQ9H479 309 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 KCNU1A8MYU2 1149 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 ZNF143P52747 638 aaPredicted RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 RUNX3Q13761 415 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 VWA2Q5GFL6 755 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 UBAP2Q5T6F2 1119 aaKnown RBP13.11□□□□□ -0.31
CDK12-201ENST00000430627 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 ZCCHC23Q6ZST2 131 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 ALDH16A1Q8IZ83 802 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 C3orf49Q96BT1 292 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 IKZF3Q9UKT9 509 aa13.11□□□□□ -0.31
CDK12-201ENST00000430627 LRRC7Q96NW7 1537 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 ZNF432O94892 652 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 OR5B17Q8NGF7 314 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 UBASH3BQ8TF42 649 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 ARRDC3Q96B67 414 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 SLC35G5Q96KT7 338 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
CDK12-201ENST00000430627 PRMT5O14744 637 aaPredicted RBP13.1□□□□□ -0.31
CDK12-201ENST00000430627 CHP2O43745 196 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 GALTP07902 379 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 POU2F2P09086 479 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 FCGR1AP12314 374 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 PKMP14618 531 aaKnown RBP13.1□□□□□ -0.31
CDK12-201ENST00000430627 VIPR1P32241 457 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 GRIA2P42262 883 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 SFRP1Q8N474 314 aa13.1□□□□□ -0.31
CDK12-201ENST00000430627 HSPA12BQ96MM6 686 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms