RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RNF31Q96EP0 1072 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 SLC45A3Q96JT2 553 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 ZNF778Q96MU6 729 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 HGH1Q9BTY7 390 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 SLC12A9Q9BXP2 914 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 IL22Q9GZX6 179 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 GRPEL1Q9HAV7 217 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 CATSPERZQ9NTU4 200 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 BFARQ9NZS9 450 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 SEMA5BQ9P283 1151 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 PRSS21Q9Y6M0 314 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 RPS6KL1Q9Y6S9 549 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 MAP3K7O43318 606 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 SPAG6O75602 509 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 MT-ND3P03897 115 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 CCNYL3P0C7X3 344 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 EBLN1P0CF75 366 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 FOLR1P15328 257 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 ZNF28P17035 718 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 STAT5AP42229 794 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 KPNA2P52292 529 aaKnown RBP17.1■□□□□ 0.33
NUP50-208ENST00000430547 MC1RQ01726 317 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 PLOD1Q02809 727 aaPredicted RBP17.1■□□□□ 0.33
NUP50-208ENST00000430547 ZNF658BQ4V348 819 aaPredicted RBP17.1■□□□□ 0.33
NUP50-208ENST00000430547 BPHLQ86WA6 291 aaPredicted RBP17.1■□□□□ 0.33
NUP50-208ENST00000430547 PHC3Q8NDX5 983 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 OR52E1Q8NGJ3 308 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 PBKQ96KB5 322 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 FANCEQ9HB96 536 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 CHRAC1Q9NRG0 131 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 FGF21Q9NSA1 209 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 ASF1AQ9Y294 204 aa17.1■□□□□ 0.33
NUP50-208ENST00000430547 KDM1AO60341 852 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 OR1I1O60431 355 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 DLSTP36957 453 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 NPY2RP49146 381 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 TTPAP49638 278 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 SARNPP82979 210 aaKnown RBP17.09■□□□□ 0.33
NUP50-208ENST00000430547 CDK16Q00536 496 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 PRKG2Q13237 762 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 TBR1Q16650 682 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 LINC00303Q3SY05 128 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 BORAQ6PGQ7 559 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 ZNF605Q86T29 641 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 HOOK3Q86VS8 718 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 AMIGO1Q86WK6 493 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 D2HGDHQ8N465 521 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 OTUD6BQ8N6M0 293 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 STARD8Q92502 1023 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 SGSM3Q96HU1 749 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 CATSPER2Q96P56 530 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 NAP1L3Q99457 506 aaPredicted RBP17.09■□□□□ 0.33
NUP50-208ENST00000430547 SEMA4CQ9C0C4 833 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 TFB2MQ9H5Q4 396 aaKnown RBP17.09■□□□□ 0.33
NUP50-208ENST00000430547 C1GALT1Q9NS00 363 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 POMT2Q9UKY4 750 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 TTC7AQ9ULT0 858 aaPredicted RBP17.09■□□□□ 0.33
NUP50-208ENST00000430547 BAHCC1Q9P281 2608 aa17.09■□□□□ 0.33
NUP50-208ENST00000430547 GOLGA6L3A6NEY3 463 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 C2orf74A8MZ97 194 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 BTN3A1O00481 513 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 ZSCAN12O43309 604 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 PRKAR1AP10644 381 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 SFTPCP11686 197 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 ITGB6P18564 788 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 TPSB2P20231 275 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 VPS41P49754 854 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 TERF1P54274 439 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 CSE1LP55060 971 aaKnown RBP17.08■□□□□ 0.32
NUP50-208ENST00000430547 TUBB4BP68371 445 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 CRADDP78560 199 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 TUBB2AQ13885 445 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 TRIP13Q15645 432 aaPredicted RBP17.08■□□□□ 0.32
NUP50-208ENST00000430547 TPSAB1Q15661 275 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 ZNF534Q76KX8 674 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 OR5AR1Q8NGP9 310 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 FCRL4Q96PJ5 515 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 TUBB2BQ9BVA1 445 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 POLG2Q9UHN1 485 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 TDRKHQ9Y2W6 561 aaKnown RBP17.08■□□□□ 0.32
NUP50-208ENST00000430547 PCDHB3Q9Y5E6 796 aa17.08■□□□□ 0.32
NUP50-208ENST00000430547 CD3EAPO15446 510 aaKnown RBP17.07■□□□□ 0.32
NUP50-208ENST00000430547 FAM87AP0C7U9 286 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 TCN2P20062 427 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 MGAT1P26572 445 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 SHMT2P34897 504 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 CDC20Q12834 499 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 GPS1Q13098 491 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 TMED2Q15363 201 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 GPR19Q15760 415 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 PWWP2BQ6NUJ5 590 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 LRRC8BQ6P9F7 803 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 NAPRTQ6XQN6 538 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 TMEM126BQ8IUX1 230 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 TBC1D21Q8IYX1 336 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 OR8K5Q8NH50 307 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 MAGOHBQ96A72 148 aaKnown RBP17.07■□□□□ 0.32
NUP50-208ENST00000430547 XKR8Q9H6D3 395 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms