RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ELAVL2Q12926 359 aaKnown RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 TAF10Q12962 218 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 DAG1Q14118 895 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 GALNT3Q14435 633 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 MBTPS1Q14703 1052 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 MOGQ16653 247 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 SETMARQ53H47 684 aaPredicted RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 PAGE3Q5JUK9 113 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 LYPLAL1Q5VWZ2 237 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 IL31Q6EBC2 164 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 MIB1Q86YT6 1006 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 LGI2Q8N0V4 545 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 FNDC5Q8NAU1 212 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF555Q8NEP9 628 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 OR4K2Q8NGD2 314 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 MAGEE2Q8TD90 523 aaPredicted RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 VPS33AQ96AX1 596 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 ISG20Q96AZ6 181 aaKnown RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 PLD4Q96BZ4 506 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 KCNA7Q96RP8 456 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 RAD9AQ99638 391 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 BCL7BQ9BQE9 202 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 C1orf50Q9BV19 199 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 OSBPL10Q9BXB5 764 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 TDRD1Q9BXT4 1180 aaKnown RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 FAIMQ9NVQ4 179 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 FAM50BQ9Y247 325 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 EIF3LQ9Y262 564 aaKnown RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 PTPRDP23468 1912 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 GPR179Q6PRD1 2367 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 FAM149AA5PLN7 773 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ASPDHA6ND91 283 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 LRRC14BA6NHZ5 514 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 CDC7O00311 574 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 E2F3O00716 465 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 PPP6CO00743 305 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 MUSKO15146 869 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RAD51BO15315 384 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RGS14O43566 566 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 TBC1D4O60343 1298 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 TPST1O60507 370 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 KCNH1O95259 989 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 THRBP10828 461 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 MBL2P11226 248 aaPredicted RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RPS3P23396 243 aaKnown RBP eCLIP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 HOXD9P28356 352 aaPredicted RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 OXTRP30559 389 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 AKT1P31749 480 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 MC4RP32245 332 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ATP5C1P36542 298 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 OR1G1P47890 313 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 PIK3CGP48736 1102 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RGS4P49798 205 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 SCNN1BP51168 640 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 HNRNPFP52597 415 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ARSFP54793 590 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 CDH15P55291 814 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 CACNG1Q06432 222 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 HYAL1Q12794 435 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 GPR17Q13304 367 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 IL18R1Q13478 541 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RAB39AQ14964 217 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 TRIM71Q2Q1W2 868 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RFX4Q33E94 735 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 TBC1D25Q3MII6 688 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RABL3Q5HYI8 236 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 NADSYN1Q6IA69 706 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ISLR2Q6UXK2 745 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 Q6ZNX1 250 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 LINC00299Q6ZSB3 139 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 KCTD8Q6ZWB6 473 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 FRA10AC1Q70Z53 315 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 LYSMD3Q7Z3D4 306 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 THAP5Q7Z6K1 395 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF554Q86TJ5 538 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 KIAA2013Q8IYS2 634 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 SNX31Q8N9S9 440 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ITFG1Q8TB96 612 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RNF217Q8TC41 542 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 METTL6Q8TCB7 284 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 PROKR1Q8TCW9 393 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 CD200R1Q8TD46 325 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RAB2BQ8WUD1 216 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 HDAC2Q92769 488 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ATOH1Q92858 354 aaPredicted RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 LINGO1Q96FE5 620 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 MSLNLQ96KJ4 702 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 CGREF1Q99674 301 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 SLC30A3Q99726 388 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 FEM1AQ9BSK4 669 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 TTLL2Q9BWV7 592 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 MAGIXQ9H6Y5 334 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ELAC1Q9H777 363 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 RPF2Q9H7B2 306 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 POLR1BQ9H9Y6 1135 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 CHCHD3Q9NX63 227 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ASIC5Q9NY37 505 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 USE1Q9NZ43 259 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 DNAJB9Q9UBS3 223 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms