RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 SLC17A7Q9P2U7 560 aa16.69■□□□□ 0.26
LINC00887-203ENST00000429578 IKZF3Q9UKT9 509 aa16.69■□□□□ 0.26
LINC00887-203ENST00000429578 WDR87Q6ZQQ6 2873 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 LAMA1P25391 3075 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 PCM1Q15154 2024 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 CDC7O00311 574 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 AK4P27144 223 aaPredicted RBP16.68■□□□□ 0.26
LINC00887-203ENST00000429578 OAS2P29728 719 aaKnown RBP16.68■□□□□ 0.26
LINC00887-203ENST00000429578 MAPK9P45984 424 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 HNRNPKP61978 463 aaKnown RBP eCLIP16.68■□□□□ 0.26
LINC00887-203ENST00000429578 ERMP1Q7Z2K6 904 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 PDZD3Q86UT5 571 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 NRROSQ86YC3 692 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 TMEM151AQ8N4L1 468 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 STAG3L4Q8TBR4 150 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 SCYL1Q96KG9 808 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 FAM111AQ96PZ2 611 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 MRPL57Q9BQC6 102 aaKnown RBP16.68■□□□□ 0.26
LINC00887-203ENST00000429578 LRRC61Q9BV99 259 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 MRPL46Q9H2W6 279 aaKnown RBP16.68■□□□□ 0.26
LINC00887-203ENST00000429578 ALG9Q9H6U8 611 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 CAAP1Q9H8G2 361 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 XPR1Q9UBH6 696 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 SNX11Q9Y5W9 270 aa16.68■□□□□ 0.26
LINC00887-203ENST00000429578 NPEPPSL1A6NEC2 478 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PLIN3O60664 434 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 EPN2O95208 641 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PROCP04070 461 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 RETP07949 1114 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SLC35G4P0C7Q5 338 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 RPL10P27635 214 aaKnown RBP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ACADLP28330 430 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ACTR1BP42025 376 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ETV4P43268 484 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ACTR1AP61163 376 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 FOXK2Q01167 660 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 BNC1Q01954 994 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SPEM2Q0P670 501 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 TCEA2Q15560 299 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 TSNQ15631 228 aaKnown RBP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SEPT7Q16181 437 aaKnown RBP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PRRT3Q5FWE3 981 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SBSNQ6UWP8 590 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ADAMTSL2Q86TH1 951 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 DENND1AQ8TEH3 1009 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ASB11Q8WXH4 323 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 NKIRAS1Q9NYS0 192 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PCOLCE2Q9UKZ9 415 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PSMD13Q9UNM6 376 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ZNF292O60281 2723 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 GFYI3L273 518 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 TK2O00142 265 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 C8GP07360 202 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ABRQ12979 859 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 OR4D1Q15615 310 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 RSPO4Q2I0M5 234 aaPredicted RBP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SLC23A3Q6PIS1 610 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SLC30A9Q6PML9 568 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ABRAXAS1Q6UWZ7 409 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 WASH2PQ6VEQ5 465 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 RASGRP3Q8IV61 690 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ANKRD42Q8N9B4 389 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SPDYE1Q8NFV5 336 aaPredicted RBP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 FOPNLQ96NB1 174 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ATOH8Q96SQ7 321 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 WWP1Q9H0M0 922 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 CNOT10Q9H9A5 744 aaKnown RBP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 CAPN10Q9HC96 672 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PARD6AQ9NPB6 346 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 WASH6PQ9NQA3 447 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 CPSF2Q9P2I0 782 aaKnown RBP16.67■□□□□ 0.26
LINC00887-203ENST00000429578 SPASTQ9UBP0 616 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 TBC1D29Q9UFV1 150 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 ADAMTS6Q9UKP5 1117 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 WDR37Q9Y2I8 494 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 PCDHGA5Q9Y5G8 931 aa16.67■□□□□ 0.26
LINC00887-203ENST00000429578 TARM1B6A8C7 271 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 IFRD1O00458 451 aaPredicted RBP16.66■□□□□ 0.26
LINC00887-203ENST00000429578 SLC16A5O15375 505 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 KERAO60938 352 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 PSIP1O75475 530 aaKnown RBP16.66■□□□□ 0.26
LINC00887-203ENST00000429578 CFIP05156 583 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 SBK3P0C264 359 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 TGM1P22735 817 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 KCNC1P48547 511 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 SP140Q13342 867 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 ELOCQ15369 112 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 UAP1L1Q3KQV9 507 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 PRAMEF14Q5SWL7 426 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 CAPRIN2Q6IMN6 1127 aaKnown RBP16.66■□□□□ 0.26
LINC00887-203ENST00000429578 CCDC63Q8NA47 563 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 ARMC2Q8NEN0 867 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 FAM76AQ8TAV0 307 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 RMDN2Q96LZ7 410 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 ELF4Q99607 663 aaPredicted RBP16.66■□□□□ 0.26
LINC00887-203ENST00000429578 ZDHHC5Q9C0B5 715 aa16.66■□□□□ 0.26
LINC00887-203ENST00000429578 PRDM8Q9NQV8 689 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms