RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FERD3LQ96RJ6 166 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 CCM2Q9BSQ5 444 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 DHRS4Q9BTZ2 278 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 FSD1LQ9BXM9 530 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 ARL5AQ9Y689 179 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 APCP25054 2843 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 BTN3A1O00481 513 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 HBQ1P09105 142 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 PVRP15151 417 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 PECAM1P16284 738 aaPredicted RBP17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 MYBPC3Q14896 1274 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 LLGL1Q15334 1064 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 MLIPQ5VWP3 458 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 MFSD7Q6UXD7 560 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 PID1Q7Z2X4 250 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 TICAM1Q8IUC6 712 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 GPR135Q8IZ08 494 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 GALNT16Q8N428 558 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 TTC13Q8NBP0 860 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 HM13Q8TCT9 377 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 N4BP2L2Q92802 583 aaPredicted RBP17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 LINC00615Q96LM1 132 aaPredicted RBP17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 FCRL5Q96RD9 977 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 RANBP9Q96S59 729 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 PITPNM3Q9BZ71 974 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 DEF6Q9H4E7 631 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 ASB8Q9H765 288 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 GPN3Q9UHW5 284 aaPredicted RBP17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 COPG1Q9Y678 874 aaKnown RBP17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 POLQO75417 2590 aa17.75■□□□□ 0.43
UPK3BP1-201ENST00000428678 CCDC66A2RUB6 948 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 BTN3A3O00478 584 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 PEX12O00623 359 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 SGTAO43765 313 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 SRP72O76094 671 aaKnown RBP17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 RALBP11234 206 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 TNFRSF8P28908 595 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 HNRNPH3P31942 346 aaKnown RBP17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 HADHAP40939 763 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 FOLR3P41439 243 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 ARHGAP25P42331 645 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 MPP3Q13368 585 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 TFDP2Q14188 446 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 DCAF10Q5QP82 559 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 LRRC38Q5VT99 294 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 KAZNQ674X7 775 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 CDHR3Q6ZTQ4 885 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 ZC3H18Q86VM9 953 aaKnown RBP17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 ZNF567Q8N184 647 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 OR4K2Q8NGD2 314 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 TRAPPC9Q96Q05 1148 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 NRTNQ99748 197 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 C17orf62Q9BQA9 187 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 DDX56Q9NY93 547 aaKnown RBP17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 FKBPLQ9UIM3 349 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 PTRH2Q9Y3E5 179 aaKnown RBP17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 ANKRD12Q6UB98 2062 aa17.74■□□□□ 0.43
UPK3BP1-201ENST00000428678 C2orf81A6NN90 581 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 KLHL41O60662 606 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 CST8O60676 142 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 KLF7O75840 302 aaPredicted RBP17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 IGHEP01854 428 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 SSPNQ14714 243 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 C1orf189Q5VU69 101 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 ZNF385CQ66K41 422 aaPredicted RBP17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 SPOCD1Q6ZMY3 1216 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 HOOK3Q86VS8 718 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 SRRM1Q8IYB3 904 aaKnown RBP17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 ZADH2Q8N4Q0 377 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 TM9SF4Q92544 642 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 XKR8Q9H6D3 395 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 RSPH14Q9UHP6 348 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 CRLS1Q9UJA2 301 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 HYOU1Q9Y4L1 999 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 OTOGQ6ZRI0 2925 aa17.73■□□□□ 0.43
UPK3BP1-201ENST00000428678 C2orf74A8MZ97 194 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 IFRD1O00458 451 aaPredicted RBP17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 IPO13O94829 963 aaKnown RBP17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 AGTP01019 485 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 CBSLP0DN79 551 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 CBSP35520 551 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 CDKN2BP42772 138 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 GLRBP48167 497 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 PRLHRP49683 370 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 C1QL3Q5VWW1 255 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 SARM1Q6SZW1 724 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 IGFL3Q6UXB1 125 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 LUZP1Q86V48 1076 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 AMIGO1Q86WK6 493 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 PHC3Q8NDX5 983 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 OR52E1Q8NGJ3 308 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 UBE2Q2Q8WVN8 375 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 P3H4Q92791 437 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 INPP5DQ92835 1189 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 HAUS1Q96CS2 278 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 VAT1Q99536 393 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 HGH1Q9BTY7 390 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 FICDQ9BVA6 458 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 ZNF552Q9H707 407 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms