RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 PRIMA1Q86XR5 153 aa13.87□□□□□ -0.19
PDE6D-203ENST00000428104 HSCBQ8IWL3 235 aa13.87□□□□□ -0.19
PDE6D-203ENST00000428104 PROKR1Q8TCW9 393 aa13.87□□□□□ -0.19
PDE6D-203ENST00000428104 MESP1Q9BRJ9 268 aa13.87□□□□□ -0.19
PDE6D-203ENST00000428104 PITPNM3Q9BZ71 974 aa13.87□□□□□ -0.19
PDE6D-203ENST00000428104 GPAMQ9HCL2 828 aa13.87□□□□□ -0.19
PDE6D-203ENST00000428104 SLC22A11Q9NSA0 550 aa13.87□□□□□ -0.19
PDE6D-203ENST00000428104 SEPT11Q9NVA2 429 aaKnown RBP13.87□□□□□ -0.19
PDE6D-203ENST00000428104 NFKBIL1Q9UBC1 381 aaPredicted RBP13.87□□□□□ -0.19
PDE6D-203ENST00000428104 DOCK10Q96BY6 2186 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 DYTNA2CJ06 578 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 KCNJ13O60928 360 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 CRYABP02511 175 aaKnown RBP13.86□□□□□ -0.19
PDE6D-203ENST00000428104 CES1P23141 567 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 SOX5P35711 763 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 ZNF135P52742 658 aaPredicted RBP13.86□□□□□ -0.19
PDE6D-203ENST00000428104 PMP22Q01453 160 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 TUBB8Q3ZCM7 444 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 HSP90AA4PQ58FG1 418 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 SHISA6Q6ZSJ9 500 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 FAM20CQ8IXL6 584 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 ZFPM2Q8WW38 1151 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
PDE6D-203ENST00000428104 NACC2Q96BF6 587 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 CSPG4P5Q96PW8 444 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 SMR3AQ99954 134 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 TRIM7Q9C029 511 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 GANQ9H2C0 597 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 FAM60AQ9NP50 221 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 SAMSN1Q9NSI8 373 aaKnown RBP13.86□□□□□ -0.19
PDE6D-203ENST00000428104 MEMO1Q9Y316 297 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 AP1M2Q9Y6Q5 423 aa13.86□□□□□ -0.19
PDE6D-203ENST00000428104 FOSL1P15407 271 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 ARL4AP40617 200 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 TMPRSS15P98073 1019 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 CEBPEQ15744 281 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 METRNLQ641Q3 311 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 POLNQ7Z5Q5 900 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 PSTKQ8IV42 348 aaKnown RBP13.85□□□□□ -0.19
PDE6D-203ENST00000428104 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
PDE6D-203ENST00000428104 ZNF655Q8N720 491 aaPredicted RBP13.85□□□□□ -0.19
PDE6D-203ENST00000428104 RASGEF1AQ8N9B8 481 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 DNAJB8Q8NHS0 232 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 MAGED4Q96JG8 741 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 TTC25Q96NG3 672 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 VPS35Q96QK1 796 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 TUBGCP2Q9BSJ2 902 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 CLSTN2Q9H4D0 955 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 RAD18Q9NS91 495 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 TXLNGQ9NUQ3 528 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 RBM22Q9NW64 420 aaKnown RBP eCLIP13.85□□□□□ -0.19
PDE6D-203ENST00000428104 FAM8A1Q9UBU6 413 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 ATP6V1DQ9Y5K8 247 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 CCDC88CQ9P219 2028 aa13.85□□□□□ -0.19
PDE6D-203ENST00000428104 C17orf113A0A1B0GUU1 675 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 OR2AG2A6NM03 316 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 MATN2O00339 956 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 BTN3A3O00478 584 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 BTN3A1O00481 513 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 ZSCAN9O15535 394 aaPredicted RBP13.84□□□□□ -0.19
PDE6D-203ENST00000428104 RASAL1O95294 804 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 HLA-DQB2P05538 268 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 CD86P42081 329 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 ZNF165P49910 485 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 JAM2P57087 298 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 POLR2FP61218 127 aaKnown RBP13.84□□□□□ -0.19
PDE6D-203ENST00000428104 TMEM220Q6QAJ8 160 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 TMC3Q7Z5M5 1100 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 MCOLN2Q8IZK6 566 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 OR11G2Q8NGC1 345 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 SPATA3Q8NHX4 192 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 LCN9Q8WX39 176 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 MAML1Q92585 1016 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 SPSB2Q99619 263 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.84□□□□□ -0.198e-7■■■□□ 14.7
PDE6D-203ENST00000428104 SRMSQ9H3Y6 488 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 NLRC4Q9NPP4 1024 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 PTGFRNQ9P2B2 879 aa13.84□□□□□ -0.19
PDE6D-203ENST00000428104 FN1P02751 2386 aaKnown RBP13.83□□□□□ -0.19
PDE6D-203ENST00000428104 GPR39O43194 453 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 RNF8O76064 485 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 MT-CYBP00156 380 aaPredicted RBP13.83□□□□□ -0.2
PDE6D-203ENST00000428104 MMP2P08253 660 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 IGFBP2P18065 325 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 ITGAXP20702 1163 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 IL1R2P27930 398 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 SERPINB6P35237 376 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 KLK7P49862 253 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 MAMLD1Q13495 774 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 KRT33BQ14525 404 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 ZIC1Q15915 447 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 DPYSL2Q16555 572 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 RBBP7Q16576 425 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 TPD52L1Q16890 204 aaPredicted RBP13.83□□□□□ -0.2
PDE6D-203ENST00000428104 TRIM73Q86UV7 250 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 BEND7Q8N7W2 519 aaPredicted RBP13.83□□□□□ -0.2
PDE6D-203ENST00000428104 CA5BP1Q8WTZ4 195 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 LRRN4Q8WUT4 740 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 HSPH1Q92598 858 aa13.83□□□□□ -0.2
PDE6D-203ENST00000428104 SDCCAG3Q96C92 435 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms