RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 LNX1Q8TBB1 728 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 PIGXQ8TBF5 258 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 GDPD5Q8WTR4 605 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 PTCD3Q96EY7 689 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 ZSWIM3Q96MP5 696 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 SMG9Q9H0W8 520 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 FMN2Q9NZ56 1722 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 UPK3BL1B0FP48 263 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 UPK3BL2E5RIL1 263 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 TNFRSF10BO14763 440 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 CLPTM1O96005 669 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 CST3P01034 146 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 ALOX12P18054 663 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 ZNF41P51814 821 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 MC1RQ01726 317 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 DGUOKQ16854 277 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 LY6G5CQ5SRR4 150 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 ERICH5Q6P6B1 374 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 LDB1Q86U70 411 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 CUZD1Q86UP6 607 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 PJA1Q8NG27 643 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 OR2AP1Q8NGE2 309 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 MIEF2Q96C03 454 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 COQ8BQ96D53 544 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 ZBED6CLQ96FA7 236 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 IGSF21Q96ID5 467 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 DCLRE1BQ9H816 532 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 FBXO9Q9UK97 447 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 SAMD4AQ9UPU9 718 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 GNEQ9Y223 722 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 FAM25EA8MYX2 175 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 SCDO00767 359 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 GNB5O14775 395 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 MUSKO15146 869 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 PGRMC2O15173 223 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 KMOO15229 486 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 AHCYL1O43865 530 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 RENP00797 406 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 RHOP08100 348 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 PREPP48147 710 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 RFX4Q33E94 735 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 SPDYCQ5MJ68 293 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 HEATR4Q86WZ0 1026 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 CREG2Q8IUH2 290 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 CENPSQ8N2Z9 138 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 CHST4Q8NCG5 386 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 BPIFB6Q8NFQ5 453 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 SLC47A1Q96FL8 570 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 PRELID1Q9Y255 219 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 TRAF6Q9Y4K3 522 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 SNX10Q9Y5X0 201 aa9.79□□□□□ -0.84
CLTCL1-202ENST00000427926 BANF1O75531 89 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 ANPEPP15144 967 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 DRD4P21917 467 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 BNIP2Q12982 314 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 OLFML2AQ68BL7 652 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 SPATA19Q7Z5L4 167 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 NUDT13Q86X67 352 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 EIF1ADQ8N9N8 165 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 RHBDD1Q8TEB9 315 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 UBASH3BQ8TF42 649 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 HDAC7Q8WUI4 952 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 DLG3Q92796 817 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 KCNJ9Q92806 393 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 KAT2AQ92830 837 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 OTUB2Q96DC9 234 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 DGCR6LQ9BY27 220 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 MKKSQ9NPJ1 570 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 ITM2CQ9NQX7 267 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 COL20A1Q9P218 1284 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 PIAS3Q9Y6X2 628 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 TULP2O00295 520 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 CCL22O00626 93 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 HDAC3O15379 428 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 B4GALT2O60909 372 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 FHP07954 510 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 PTPN5P54829 565 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 PSME3P61289 254 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 SLC39A5Q6ZMH5 540 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 GALNTL5Q7Z4T8 443 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 SAPCD2Q86UD0 394 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 BTBD10Q9BSF8 475 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 CCM2Q9BSQ5 444 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 FBXW11Q9UKB1 542 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 TCAF1Q9Y4C2 921 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 TMEM265A0A087WTH1 108 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 ILVBLA1L0T0 632 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 PRR5-ARHGAP8B1AHC4 643 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 GATBO75879 557 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 C4BPAP04003 597 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 LINGO3P0C6S8 592 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 BMP6P22004 513 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 TAS2R40P59535 323 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 SLC10A6Q3KNW5 377 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 LCN1P1Q5VSP4 162 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 HGSNATQ68CP4 663 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 ZNF540Q8NDQ6 660 aa9.78□□□□□ -0.84
CLTCL1-202ENST00000427926 TLR10Q9BXR5 811 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms