RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 RAB33AQ14088 237 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 ATP6AP1Q15904 470 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 PLEKHG6Q3KR16 790 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 ATP13A5Q4VNC0 1218 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 SPANXN4Q5MJ08 99 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 PTRH1Q86Y79 214 aaKnown RBP11.4□□□□□ -0.58
FIRRE-201ENST00000427391 HID1Q8IV36 788 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 PHACTR4Q8IZ21 702 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 PDPRQ8NCN5 879 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 RHBDF1Q96CC6 855 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 PDLIM5Q96HC4 596 aaKnown RBP11.4□□□□□ -0.58
FIRRE-201ENST00000427391 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
FIRRE-201ENST00000427391 SLCO3A1Q9UIG8 710 aa11.4□□□□□ -0.58
FIRRE-201ENST00000427391 UPK3BL1B0FP48 263 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 UPK3BL2E5RIL1 263 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 H0YJX3 145 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 TCF3P15923 654 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 LAPTM5Q13571 262 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 NKG7Q16617 165 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 CERS6Q6ZMG9 384 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 C10orf111Q8N326 155 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 LIX1Q8N485 282 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 FIG4Q92562 907 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 LRRC3Q9BY71 257 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ZDHHC6Q9H6R6 413 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ZNF490Q9ULM2 529 aaPredicted RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 KANSL1LA0AUZ9 987 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 SEC22BO75396 215 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 GSNP06396 782 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ENO2P09104 434 aaPredicted RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 CDH2P19022 906 aaPredicted RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 VARSP26640 1264 aaKnown RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 RGS4P49798 205 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 EEFSECP57772 596 aaKnown RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 HSPA14Q0VDF9 509 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 TTC33Q6PID6 262 aaPredicted RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ENPP6Q6UWR7 440 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 SERPINA13PQ6UXR4 307 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ZNF783Q6ZMS7 281 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 VRK3Q8IV63 474 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 RGL4Q8IZJ4 473 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 HS3ST5Q8IZT8 346 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 NXPE1Q8N323 547 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 OR10A6Q8NH74 314 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 FBXO30Q8TB52 745 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 SLC22A17Q8WUG5 538 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 NSMCE2Q96MF7 247 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 CD244Q9BZW8 370 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 RNF208Q9H0X6 261 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 VCX3AQ9NNX9 186 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 HCFC1R1Q9NWW0 138 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 OARD1Q9Y530 152 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 TNPO3Q9Y5L0 923 aaKnown RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 CEP290O15078 2479 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 TMX2-CTNND1H3BSU7 103 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 B4GAT1O43505 415 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 GLUD1P00367 558 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 UGT2B4P06133 528 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 GPIP06744 558 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 SRCP12931 536 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 DGKAP23743 735 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 HLA-FP30511 346 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 CCR7P32248 378 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ZNF648Q5T619 568 aaPredicted RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 INTS11Q5TA45 600 aaKnown RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 B3GNT6Q6ZMB0 384 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ANKRD46Q86W74 232 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 TCEAL8Q8IYN2 117 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 CHST14Q8NCH0 376 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 TSPEARQ8WU66 669 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 GFM2Q969S9 779 aaKnown RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ASIC4Q96FT7 647 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 THUMPD3Q9BV44 507 aaKnown RBP11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ATP13A3Q9H7F0 1226 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 DMTF1Q9Y222 760 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 ATP11BQ9Y2G3 1177 aa11.39□□□□□ -0.59
FIRRE-201ENST00000427391 PRUNE2Q8WUY3 3088 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 TRBV5-4A0A0C4DH59 114 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 CLOCKO15516 846 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 TGM5O43548 720 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 RASAL1O95294 804 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 LDLRP01130 860 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 EPORP19235 508 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 SPAM1P38567 509 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 CTBSQ01459 385 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 GRIK2Q13002 908 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 KIAA0040Q15053 153 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 CRY1Q16526 586 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 POM121L1PQ3SYA9 428 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 MSRB3Q8IXL7 192 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 MFSD2AQ8NA29 543 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 KLHL23Q8NBE8 558 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 OR2AP1Q8NGE2 309 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 FOXJ1Q92949 421 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 ULK4Q96C45 1275 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 CEP295NLQ96MC4 621 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 ZNF583Q96ND8 569 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
FIRRE-201ENST00000427391 MTG2Q9H4K7 406 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms