RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CCNKO75909 580 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 GADD45GO95257 159 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 SNHG28P0DPA3 235 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 CYP2U1Q7Z449 544 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 TMEM192Q8IY95 271 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 LPIN3Q9BQK8 851 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 TBC1D17Q9HA65 648 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 C9IYK1 514 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 NPHS1O60500 1241 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 TRMUO75648 421 aaKnown RBP17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 ESR1P03372 595 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 CPN2P22792 545 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 GRK6P43250 576 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 GJA9P57773 515 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 SEMG2Q02383 582 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 LAPTM4BQ86VI4 370 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 OR10H4Q8NGA5 316 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 PIWIL1Q96J94 861 aaKnown RBP17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 MROH2AA6NES4 1674 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 AHCYP23526 432 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 SLC1A2P43004 574 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 TLR1Q15399 786 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 TEAD4Q15561 434 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 FSTL5Q8N475 847 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 HDDC3Q8N4P3 179 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 TMLHEQ9NVH6 421 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 C1orf109Q9NX04 203 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZNF221Q9UK13 617 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 ITGB1BP2Q9UKP3 347 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 MYCLP1P12525 358 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZFP69Q49AA0 526 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 IFI44LQ53G44 452 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 EGFLAMQ63HQ2 1017 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 CLEC4CQ8WTT0 213 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 NKD1Q969G9 470 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 OR51V1Q9H2C8 321 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 IL1RAPQ9NPH3 570 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 COL20A1Q9P218 1284 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 HEBP2Q9Y5Z4 205 aa17.68■□□□□ 0.42
ARHGEF28-203ENST00000426542 NSG1P42857 185 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 BNIP1Q12981 228 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZNF311Q5JNZ3 666 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 SLC51AQ86UW1 340 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZDHHC21Q8IVQ6 265 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 CCDC36Q8IYA8 594 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 IL12RB2Q99665 862 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 EURLQ9NYK6 297 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZNF541Q9H0D2 1346 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 UBXN7O94888 489 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 GALK1P51570 392 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 USP30Q70CQ3 517 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 FITM2Q8N6M3 262 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 OR2AG1Q9H205 316 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 PFDN2Q9UHV9 154 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 GNB5O14775 395 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 E2F2Q14209 437 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 PITRM1Q5JRX3 1037 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZNF554Q86TJ5 538 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 APOBEC3GQ9HC16 384 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 DNAAF2Q9NVR5 837 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 HMGXB4Q9UGU5 601 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 AIREO43918 545 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 NOBOXO60393 691 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 LGR5O75473 907 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZNF823P16415 610 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 IL7RP16871 459 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 CEBPGP53567 150 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 GDF10P55107 478 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 IFT27Q9BW83 186 aa17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 INTS10Q9NVR2 710 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-203ENST00000426542 CHRNB2P17787 502 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 CSKP41240 450 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 PDX1P52945 283 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 GRSF1Q12849 480 aaKnown RBP eCLIP17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 FAM174BQ3ZCQ3 159 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 RALGPS1Q5JS13 557 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 RNF220Q5VTB9 566 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 P2RY8Q86VZ1 359 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 CST11Q9H112 138 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 MED28Q9H204 178 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 ZDHHC4Q9NPG8 344 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 HCN3Q9P1Z3 774 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 CNTN6Q9UQ52 1028 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 VARSP26640 1264 aaKnown RBP17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 MTPNP58546 118 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 AP3S2P59780 193 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 RPS14P62263 151 aaKnown RBP17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 CARTPTQ16568 116 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 FAM156AQ8NDB6 213 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 ARNTL2Q8WYA1 636 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 SMPDL3BQ92485 455 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 CTSOP43234 321 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 C1QTNF8P60827 252 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 PRKD1Q15139 912 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 NODALQ96S42 347 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 GATA5Q9BWX5 397 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 C8AP07357 584 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 ASPAP45381 313 aa17.66■□□□□ 0.42
ARHGEF28-203ENST00000426542 HNRNPDQ14103 355 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms