RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 IL22RA1Q8N6P7 574 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 OR52E1Q8NGJ3 308 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 ELMO1Q92556 727 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 MFSD3Q96ES6 412 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 OSBPL9Q96SU4 736 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 CD180Q99467 661 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 IL22Q9GZX6 179 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 MVB12BQ9H7P6 319 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 SYBUQ9NX95 663 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 BFARQ9NZS9 450 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 CDYLQ9Y232 598 aa17.83■□□□□ 0.44
SMARCAL1-205ENST00000425815 KALRNO60229 2985 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 TLCD2A6NGC4 264 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 QSOX1O00391 747 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 IFRD1O00458 451 aaPredicted RBP17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 ZNF185O15231 689 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 SPAG6O75602 509 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 TIAF1O95411 115 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 FTH1P02794 183 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 OR56A5P0C7T3 313 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 VPS41P49754 854 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 GPS1Q13098 491 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 TAF1BQ53T94 588 aaPredicted RBP17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 DNTTIP2Q5QJE6 756 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 MPP5Q8N3R9 675 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 D2HGDHQ8N465 521 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 EXD3Q8N9H8 876 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 ACTRT1Q8TDG2 376 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 LCN9Q8WX39 176 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 CPT1BQ92523 772 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 PDLIM2Q96JY6 352 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 XKR8Q9H6D3 395 aa17.82■□□□□ 0.44
SMARCAL1-205ENST00000425815 UBA6A0AVT1 1052 aaPredicted RBP17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 USP27XA6NNY8 438 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 AP3B1O00203 1094 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 BTN3A1O00481 513 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 CD3EAPO15446 510 aaKnown RBP17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 ZSCAN12O43309 604 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 TMEM63AO94886 807 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 EBLN1P0CF75 366 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 ITGB6P18564 788 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 F8A1P23610 371 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 ABHD18Q0P651 414 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 COL9A2Q14055 689 aaPredicted RBP17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 LY6DQ14210 128 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 MAP7Q14244 749 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 KMT5CQ86Y97 462 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 VRK3Q8IV63 474 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 ADGRF3Q8IZF5 1079 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 SIDT2Q8NBJ9 832 aaKnown RBP17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 OR5AR1Q8NGP9 310 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 ULBP3Q9BZM4 244 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 P2RY12Q9H244 342 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 SRMSQ9H3Y6 488 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 MRM3Q9HC36 420 aaKnown RBP17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 CATSPERZQ9NTU4 200 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 IL17BQ9UHF5 180 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 POMT2Q9UKY4 750 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 SNX12Q9UMY4 172 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 SOX13Q9UN79 622 aa17.81■□□□□ 0.44
SMARCAL1-205ENST00000425815 GPC4O75487 556 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 KIAA0754O94854 1291 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 PRDX3P30048 256 aaKnown RBP17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 HSD11B2P80365 405 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 PWWP2BQ6NUJ5 590 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 ZNF449Q6P9G9 518 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 CCDC137Q6PK04 289 aaKnown RBP17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 AMIGO1Q86WK6 493 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 KRT222Q8N1A0 295 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 GALNT6Q8NCL4 622 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 EXTL1Q92935 676 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 TTC1Q99614 292 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 TRIM56Q9BRZ2 755 aaKnown RBP17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 HGH1Q9BTY7 390 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 CARD6Q9BX69 1037 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 TWSG1Q9GZX9 223 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 ICKQ9UPZ9 632 aa17.8■□□□□ 0.44
SMARCAL1-205ENST00000425815 SLC9B1P1A6NJY1 282 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 EIF4E1BA6NMX2 242 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 GOLGA8KD6RF30 607 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 GOLGA8TH3BQL2 631 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 PGRMC1O00264 195 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 PRMT5O14744 637 aaPredicted RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 TERTO14746 1132 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 NKX2-8O15522 239 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 VAPBO95292 243 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 ZBTB11O95625 1053 aaPredicted RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 STAT5AP42229 794 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 CSE1LP55060 971 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 TUBB3Q13509 450 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 TBR1Q16650 682 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 ARMC6Q6NXE6 501 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 C6orf15Q6UXA7 325 aaPredicted RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 UNC5AQ6ZN44 842 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 PPP1R3BQ86XI6 285 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 RASGRP3Q8IV61 690 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 CARFQ8N187 725 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 AGGF1Q8N302 714 aaeCLIP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms