RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 WFDC5Q8TCV5 224 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CENPNQ96H22 339 aaPredicted RBP10.49□□□□□ -0.73
CUX1-205ENST00000425244 VPS50Q96JG6 964 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 ZNF382Q96SR6 550 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 BOCQ9BWV1 1114 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CIPCQ9C0C6 399 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 NSUN3Q9H649 340 aaKnown RBP10.49□□□□□ -0.73
CUX1-205ENST00000425244 NANOGQ9H9S0 305 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 TDP1Q9NUW8 608 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 ANAPC2Q9UJX6 822 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 POLR3HQ9Y535 204 aaPredicted RBP10.49□□□□□ -0.73
CUX1-205ENST00000425244 EI24O14681 340 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 PRMT5O14744 637 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 FFAR3O14843 346 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GPR42O15529 346 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 LINC01565O15544 149 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 OLFM2O95897 454 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 G6PDP11413 515 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 PCSK6P29122 969 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 WEE1P30291 646 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GKP32189 559 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ZFP36L2P47974 494 aaKnown RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 HSPA7P48741 367 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 SH3BGRP55822 239 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 MTPNP58546 118 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 SEMG2Q02383 582 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CACNG1Q06432 222 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 RAB30Q15771 203 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 SGO1Q5FBB7 561 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 COQ5Q5HYK3 327 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 Q6ZSR9 355 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GOLGA7Q7Z5G4 137 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 TDHQ8IZJ6 230 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 OFCC1Q8IZS5 231 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 TRPV3Q8NET8 790 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 PROKR1Q8TCW9 393 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ZNF707Q96C28 371 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 TIFAQ96CG3 184 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 EID2BQ96D98 161 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 FBXL20Q96IG2 436 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 EGFL8Q99944 293 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 C1QTNF3Q9BXJ4 246 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CLPBQ9H078 707 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 LINC00597Q9H2U6 94 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 SOX17Q9H6I2 414 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 LIN28AQ9H9Z2 209 aaKnown RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 CLK4Q9HAZ1 481 aaKnown RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 SPATA7Q9P0W8 599 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 LHX3Q9UBR4 397 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CLEC4EQ9ULY5 219 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 FAM234BA2RU67 622 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GREM1O60565 184 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 PRAMEF1O95521 474 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GPIP06744 558 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ZNF23P17027 643 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 HMOX2P30519 316 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 SLC5A2P31639 672 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CSKP41240 450 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 OR4D2P58180 307 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 PRKG2Q13237 762 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ADRM1Q16186 407 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 OR4F6Q8NGB9 312 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 MAGEE2Q8TD90 523 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 RNF145Q96MT1 663 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 C9orf16Q9BUW7 83 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 BRINP2Q9C0B6 783 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 RPF2Q9H7B2 306 aaKnown RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 NUDT4Q9NZJ9 180 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 IL17CQ9P0M4 197 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 VPS51Q9UID3 782 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 PADI4Q9UM07 663 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ANGPTL3Q9Y5C1 460 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CEPT1Q9Y6K0 416 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 BRWD1Q9NSI6 2320 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 C1orf232A0A0U1RR37 186 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 DLGAP1O14490 977 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CDH2P19022 906 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 UGT1A1P22309 533 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 UGT1A4P22310 534 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CA5AP35218 305 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 UGT1A3P35503 534 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 UGT1A5P35504 534 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GDF5P43026 501 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CCT8P50990 548 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 SLC7A9P82251 487 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 MERTKQ12866 999 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GTF2H2Q13888 395 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 AP5B1Q2VPB7 878 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ARMC12Q5T9G4 340 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GTF2H2CQ6P1K8 395 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 GET4Q7L5D6 327 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 LPCAT2Q7L5N7 544 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 SERPINA9Q86WD7 417 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 NAT16Q8N8M0 369 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 LKAAEAR1Q8TD35 194 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 MYO19Q96H55 970 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 FEM1AQ9BSK4 669 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms