RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 C12orf42Q96LP6 360 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 GDF15Q99988 308 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 AIFM2Q9BRQ8 373 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 FSD1LQ9BXM9 530 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 LRRC3Q9BY71 257 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 MARCH4Q9P2E8 410 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 MUTYHQ9UIF7 546 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 TMEFF2Q9UIK5 374 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 PKP3Q9Y446 797 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 LAMA2P24043 3122 aaKnown RBP11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 SSC5DA1L4H1 1573 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 METTL15A6NJ78 407 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 H3BQ06 376 aaPredicted RBP11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 SHOXO15266 292 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 TREHO43280 583 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 VIPP01282 170 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 ANXA6P08133 673 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 GRK3P35626 688 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 PIK3CGP48736 1102 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 DGKEP52429 567 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 HMGCS2P54868 508 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC35A2P78381 396 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 FAM205BPQ63HN1 556 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 GCNT7Q6ZNI0 430 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 CEP68Q76N32 757 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 PTRH1Q86Y79 214 aaKnown RBP11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 FAM126BQ8IXS8 530 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 RDM1Q8NG50 284 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 GIMAP1Q8WWP7 306 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 CENPIQ92674 756 aaPredicted RBP11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 KLRG1Q96E93 195 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 KIFC1Q9BW19 673 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 UCK2Q9BZX2 261 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 CACNG4Q9UBN1 327 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 C3orf18Q9UK00 162 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 TBC1D24Q9ULP9 559 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 FAM50BQ9Y247 325 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 DCLK1O15075 740 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 RGS10O43665 173 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 TSPAN9O75954 239 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 CYP11A1P05108 521 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC15A1P46059 708 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 UGP2Q16851 508 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 PKDCCQ504Y2 493 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 PGBD5Q8N414 524 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 CDYL2Q8N8U2 506 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 BEST2Q8NFU1 509 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 SDHCQ99643 169 aaPredicted RBP11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 ANKHQ9HCJ1 492 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF451Q9Y4E5 1061 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 IPPQ9Y573 584 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 ASB1Q9Y576 335 aa11.1□□□□□ -0.63
SEC61A1-202ENST00000424880 SAGE2PA6NJ88 616 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 TLL1O43897 1013 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 VTNP04004 478 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 CHRM5P08912 532 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 POU3F3P20264 500 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 MSH3P20585 1137 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 IGFBP6P24592 240 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 IGFBP5P24593 272 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 SSTR4P31391 388 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 KRT20P35900 424 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 MATKP42679 507 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 EFNA5P52803 228 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 GABARAPL2P60520 117 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 HERVK_113P63132 956 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 FCHO2Q0JRZ9 810 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 RCAN2Q14206 197 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF484Q5JVG2 852 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 SPANXN2Q5MJ10 180 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 PRSS48Q7RTY5 328 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 TMEM199Q8N511 208 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF557Q8N988 423 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 CLHC1Q8NHS4 586 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 PROKR1Q8TCW9 393 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 TBL1YQ9BQ87 522 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 C2orf49Q9BVC5 232 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ERVK-6Q9BXR3 956 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 GOLGA2P5Q9HBQ8 144 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 GALPQ9UBC7 116 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 GMPPBQ9Y5P6 360 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 SUPT3HB4E1H0 165 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 DDNO94850 711 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 UMPSP11172 480 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 UBA1P22314 1058 aaKnown RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ARSDP51689 593 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 NKX3-2P78367 333 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ITKQ08881 620 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 STXBP2Q15833 593 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 BAK1Q16611 211 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 CYP27C1Q4G0S4 372 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ARMC4Q5T2S8 1044 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 TUBA3EQ6PEY2 450 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 AMIGO1Q86WK6 493 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 OR2T12Q8NG77 320 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 CEP19Q96LK0 163 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 TEKT5Q96M29 485 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms