RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RPA2P15927 270 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 GCFC2P16383 781 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 DRD4P21917 467 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CPN2P22792 545 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CYP2F1P24903 491 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CCND3P30281 292 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TIA1P31483 386 aaKnown RBP eCLIP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SERPINB6P35237 376 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PBX1P40424 430 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 GATMP50440 423 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 BLKP51451 505 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PRMT2P55345 433 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TAS2R50P59544 299 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 LILRA4P59901 499 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TPM4P67936 248 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 NOP14P78316 857 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 BLOC1S1P78537 153 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SARNPP82979 210 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KRTAP1-1Q07627 177 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PPP1R8Q12972 351 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SRSF5Q13243 272 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 BFSP2Q13515 415 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 FHL3Q13643 280 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 LAMB3Q13751 1172 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 GPR162Q16538 588 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PDK4Q16654 411 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ZIK1Q3SY52 487 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 DCST1Q5T197 706 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 FAM102AQ5T9C2 384 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SERTAD4-AS1Q5TG53 156 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TXNDC8Q6A555 127 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 WBP2NLQ6ICG8 309 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SULT1C3Q6IMI6 304 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 C8orf74Q6P047 294 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF529Q6P280 563 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CLEC9AQ6UXN8 241 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 RANBP10Q6VN20 620 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM182Q6ZP80 229 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CLEC17AQ6ZS10 378 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SEPT14Q6ZU15 432 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 DET1Q7L5Y6 550 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ADAMTSL2Q86TH1 951 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CUZD1Q86UP6 607 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 NUDT13Q86X67 352 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ERO1BQ86YB8 467 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SYCE1Q8N0S2 351 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 C11orf44Q8N8P7 122 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TMIEQ8NEW7 156 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM185AQ8NFB2 350 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 RNASE8Q8TDE3 154 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 HEXDCQ8WVB3 486 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 UBLCP1Q8WVY7 318 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KCNJ9Q92806 393 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 VOPP1Q96AW1 172 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ISG20Q96AZ6 181 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 AP2M1Q96CW1 435 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM68Q96MH6 324 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 QRFPRQ96P65 431 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF607Q96SK3 696 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PCYT2Q99447 389 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SEPT5Q99719 369 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ASCL2Q99929 193 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ADAM2Q99965 735 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ZSWIM1Q9BR11 485 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF577Q9BSK1 485 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KATNB1Q9BVA0 655 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 FICDQ9BVA6 458 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PINK1Q9BXM7 581 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SPATC1LQ9H0A9 340 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 FZD8Q9H461 694 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KIF9Q9HAQ2 790 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 AGPAT3Q9NRZ7 376 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SLC22A11Q9NSA0 550 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 FAM207AQ9NSI2 230 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ETNK2Q9NVF9 386 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 HYPKQ9NX55 129 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SYBUQ9NX95 663 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SLCO1C1Q9NYB5 712 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KLQ9UEF7 1012 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SLC24A2Q9UI40 661 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ANGPTL2Q9UKU9 493 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KIAA1257Q9ULG3 409 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CDC14AQ9UNH5 594 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PLA2G4CQ9UP65 541 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KCNK6Q9Y257 313 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 SLC27A6Q9Y2P4 619 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 MFHAS1Q9Y4C4 1052 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 AP4B1Q9Y6B7 739 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 NPC1L1Q9UHC9 1359 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CYP3A7-CYP3A51PA0A087WV96 503 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 LOC100506127A0A0U1RQW1 187 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 A0A1B0GTQ1 180 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FAM149AA5PLN7 773 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 NPIPB5A8MRT5 1133 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PRR23D1E9PI22 279 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 E9PLN8 166 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 XPO1O14980 1071 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 OGTO15294 1046 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CHADO15335 359 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms