RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 COPG2Q9UBF2 871 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 GPN3Q9UHW5 284 aaPredicted RBP16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 FER1L5A0AVI2 2057 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 GSAPA4D1B5 854 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 ZNF487B1APH4 448 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 MASP2O00187 686 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 BTN3A1O00481 513 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 PMPCBO75439 489 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 PROSCO94903 275 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 MSH3P20585 1137 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 DCDP81605 110 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 AIMP2Q13155 320 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 KRT33BQ14525 404 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 PDK1Q15118 436 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 BCL7AQ4VC05 210 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 B3GNTL1Q67FW5 361 aaPredicted RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 SLC9A4Q6AI14 798 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 GPR135Q8IZ08 494 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 DNAJB14Q8TBM8 379 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 PROKR1Q8TCW9 393 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 LCN9Q8WX39 176 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 RAPGEF5Q92565 580 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 RELTQ969Z4 430 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 OLFM3Q96PB7 478 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 TFB2MQ9H5Q4 396 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 HACD3Q9P035 362 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 HEY1Q9Y5J3 304 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 KLF2Q9Y5W3 355 aaPredicted RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 BZW2Q9Y6E2 419 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 HIVEP1P15822 2718 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 ANKRD12Q6UB98 2062 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 SETD2Q9BYW2 2564 aaPredicted RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 A0A0A6YYK5 440 aaPredicted RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 AGPSO00116 658 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 CNOT3O75175 753 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 UMODP07911 640 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 HIF1AQ16665 826 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 SASS6Q6UVJ0 657 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 DET1Q7L5Y6 550 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 CFAP206Q8IYR0 622 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 ZNF398Q8TD17 642 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 TEKT5Q96M29 485 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 SLX1AQ9BQ83 275 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 AP1M1Q9BXS5 423 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 CHRNA10Q9GZZ6 450 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 UBP1Q9NZI7 540 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 IFT80Q9P2H3 777 aaPredicted RBP16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 NDOR1Q9UHB4 597 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 FAM153AQ9UHL3 310 aa16.19■□□□□ 0.18
CHCHD3-202ENST00000423635 CCDC66A2RUB6 948 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 SGTAO43765 313 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 POLBP06746 335 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 PVRP15151 417 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 PTGER4P35408 488 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 GABRA4P48169 554 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 ZNF169Q14929 603 aaPredicted RBP16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 NOMO1Q15155 1222 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 CYP2A13Q16696 494 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 SIRPB2Q5JXA9 342 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 FCRL6Q6DN72 434 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 RPUSD3Q6P087 351 aaKnown RBP16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 KDELC1Q6UW63 502 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 FJX1Q86VR8 437 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 VSIG1Q86XK7 387 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 LILRA3Q8N6C8 439 aaPredicted RBP16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 SPRTNQ9H040 489 aaPredicted RBP16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 FAM60AQ9NP50 221 aa16.18■□□□□ 0.18
CHCHD3-202ENST00000423635 CNTRLQ7Z7A1 2325 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 SVILO95425 2214 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 C17orf113A0A1B0GUU1 675 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 C2orf74A8MZ97 194 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 PPP1R12AO14974 1030 aaPredicted RBP16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 OR2B3O76000 313 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 AKT1P31749 480 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 WNT3AP56704 352 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 CDC16Q13042 620 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 STX1AQ16623 288 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 KRTAP21-3Q3LHN1 58 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 FIGNQ5HY92 759 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 C1orf189Q5VU69 101 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 AGAP7PQ5VUJ5 663 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 PRAMEF13Q5VWM6 474 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 GLT6D1Q7Z4J2 308 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 GDF7Q7Z4P5 450 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 ADGRF3Q8IZF5 1079 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 LURAP1Q96LR2 239 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 AGAP4Q96P64 663 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 FERD3LQ96RJ6 166 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 KLHL25Q9H0H3 589 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 CHMP5Q9NZZ3 219 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 CDYLQ9Y232 598 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 PKP3Q9Y446 797 aa16.17■□□□□ 0.18
CHCHD3-202ENST00000423635 PCM1Q15154 2024 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 A0A087X0T9 212 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 C3orf70A6NLC5 250 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 BUD23O43709 281 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 FAM228BP0C875 321 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 PTPN3P26045 913 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 CD68P34810 354 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 FOXL2P58012 376 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms