RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ART4Q93070 314 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ZNF669Q96BR6 464 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 TEFMQ96QE5 360 aaKnown RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 TCF12Q99081 682 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 DDA1Q9BW61 102 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 CARD6Q9BX69 1037 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 RAB33BQ9H082 229 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 SRMSQ9H3Y6 488 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 KCND1Q9NSA2 647 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 HRASLS2Q9NWW9 162 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 OCIAD1Q9NX40 245 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 OGFRQ9NZT2 677 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ACSL6Q9UKU0 697 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ASF1AQ9Y294 204 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 PCDHGA3Q9Y5H0 932 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 RPS6KL1Q9Y6S9 549 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 UNC13CQ8NB66 2214 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 COL27A1Q8IZC6 1860 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 URB1O60287 2271 aaKnown RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 ZFC3H1O60293 1989 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 OR5K3A6NET4 321 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 MATN2O00339 956 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 DNALI1O14645 258 aaPredicted RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 NDC80O14777 642 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 KPNA5O15131 536 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 APOA4P06727 396 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 LIPCP11150 499 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 ITGB6P18564 788 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 OGNP20774 298 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 RPS3P23396 243 aaKnown RBP eCLIP10.66□□□□□ -0.7
USP49-204ENST00000423567 PDHA2P29803 388 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 LEPRP48357 1165 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 SEPHS1P49903 392 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 ATP1A2P50993 1020 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 EIF3BP55884 814 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 MC2RQ01718 297 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 TLE3Q04726 772 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 FOXM1Q08050 763 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 HSPA14Q0VDF9 509 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 ZNF658BQ4V348 819 aaPredicted RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 DNTTIP2Q5QJE6 756 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 RNASEH2BQ5TBB1 312 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 IZUMO3Q5VZ72 239 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 XKR5Q6UX68 686 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 FAM92BQ6ZTR7 304 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 HOOK3Q86VS8 718 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 OR4E2Q8NGC2 313 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 GABPB2Q8TAK5 448 aaPredicted RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 UBXN4Q92575 508 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 CD180Q99467 661 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 ZPBPQ9BS86 351 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 TRIT1Q9H3H1 467 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 ZNF768Q9H5H4 540 aaKnown RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 FBXO8Q9NRD0 319 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 FOXJ2Q9P0K8 574 aa10.66□□□□□ -0.7
USP49-204ENST00000423567 MARCH4Q9P2E8 410 aaPredicted RBP10.66□□□□□ -0.7
USP49-204ENST00000423567 SLC5A10A0PJK1 596 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 OR6C74A6NCV1 312 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 TLCD2A6NGC4 264 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 C9orf172C9J069 976 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 GOLGA8KD6RF30 607 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 H3BMM5 538 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 STMND1H3BQB6 276 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 GOLGA8TH3BQL2 631 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 POLR1CO15160 346 aaPredicted RBP10.65□□□□□ -0.7
USP49-204ENST00000423567 USP1O94782 785 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 RPN2P04844 631 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 PGAM1P18669 254 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 CSE1LP55060 971 aaKnown RBP10.65□□□□□ -0.7
USP49-204ENST00000423567 TMPRSS3P57727 454 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 CXADRP78310 365 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 ANKRD20A4Q4UJ75 823 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 NEPROQ6NW34 567 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 OTOAQ7RTW8 1153 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 ZFAND4Q86XD8 727 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 LMNTD2Q8IXW0 634 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 TBC1D21Q8IYX1 336 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 PHC3Q8NDX5 983 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 OR52E1Q8NGJ3 308 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 CALML6Q8TD86 181 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 STAMBPL1Q96FJ0 436 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 HGH1Q9BTY7 390 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 TFB2MQ9H5Q4 396 aaKnown RBP10.65□□□□□ -0.7
USP49-204ENST00000423567 POLG2Q9UHN1 485 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 B3GALT1Q9Y5Z6 326 aa10.65□□□□□ -0.7
USP49-204ENST00000423567 FREM2Q5SZK8 3169 aa10.65□□□□□ -0.71
USP49-204ENST00000423567 ASPMQ8IZT6 3477 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
USP49-204ENST00000423567 GSAPA4D1B5 854 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 E5RI56 91 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
USP49-204ENST00000423567 TTC4O95801 387 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 ESR1P03372 595 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 POLR2CP19387 275 aaPredicted RBP10.64□□□□□ -0.71
USP49-204ENST00000423567 CDH3P22223 829 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 ARNTP27540 789 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 FMO4P31512 558 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 CCR7P32248 378 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 PTGIRP43119 386 aa10.64□□□□□ -0.71
USP49-204ENST00000423567 MAGEA3P43357 314 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms