RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 ATXN7L1Q9ULK2 861 aaPredicted RBP8.53□□□□□ -1.04
SSB-205ENST00000422006 AP4E1Q9UPM8 1137 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 CDK5RAP2Q96SN8 1893 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 OR6C74A6NCV1 312 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 H0Y626 953 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 AIM2O14862 343 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 B4GAT1O43505 415 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 CDC123O75794 336 aaPredicted RBP8.53□□□□□ -1.04
SSB-205ENST00000422006 SLITRK3O94933 977 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 ACAA1P09110 424 aaPredicted RBP8.53□□□□□ -1.04
SSB-205ENST00000422006 CAPGP40121 348 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 KCNK10P57789 538 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 HERVK_113P63132 956 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 ZNF45Q02386 682 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 TMEM132BQ14DG7 1078 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 LLGL1Q15334 1064 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 TMEM44Q2T9K0 475 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 CLLU1Q5K131 121 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 C3orf33Q6P1S2 294 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 ARHGAP11AQ6P4F7 1023 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 KDELC1Q6UW63 502 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 TEX261Q6UWH6 196 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 USP51Q70EK9 711 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 RRM2BQ7LG56 351 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 NRARPQ7Z6K4 114 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 RNF148Q8N7C7 305 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 TEX19Q8NA77 164 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 MCFD2Q8NI22 146 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 ATG4AQ8WYN0 398 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 EXOSC8Q96B26 276 aaKnown RBP8.53□□□□□ -1.04
SSB-205ENST00000422006 GMCL1Q96IK5 515 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 SERAC1Q96JX3 654 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 ZNF778Q96MU6 729 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 QKIQ96PU8 341 aaKnown RBP eCLIP8.53□□□□□ -1.04
SSB-205ENST00000422006 DCLRE1CQ96SD1 692 aaKnown RBP8.53□□□□□ -1.04
SSB-205ENST00000422006 DGCR6LQ9BY27 220 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 ELOVL6Q9H5J4 265 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 GPRC5CQ9NQ84 441 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 KLHL21Q9UJP4 597 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 ZNF112Q9UJU3 913 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 VAV3Q9UKW4 847 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 SNX6Q9UNH7 406 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 U3KQ87 197 aa8.53□□□□□ -1.04
SSB-205ENST00000422006 DDX60LQ5H9U9 1706 aaKnown RBP8.53□□□□□ -1.04
SSB-205ENST00000422006 MAST2Q6P0Q8 1798 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 TRBV23OR9-2A0A075B6M9 112 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 MROH6A6NGR9 719 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 RRN3P2A6NIE6 340 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 SLC30A4O14863 429 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 STX7O15400 261 aaKnown RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 CLDN3O15551 220 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 POMCP01189 267 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 FTH1P02794 183 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 C2P06681 752 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 SLC9A1P19634 815 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 SLC7A1P30825 629 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 ADRA1BP35368 520 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 NUP62P37198 522 aaPredicted RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 AFF1P51825 1210 aaKnown RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 RHDQ02161 417 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 TFCP2Q12800 502 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 KLF10Q13118 480 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 SGCGQ13326 291 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 KCNAB1Q14722 419 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 TRAM2Q15035 370 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 TRIP4Q15650 581 aaPredicted RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 ETFDHQ16134 617 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 PFKFB4Q16877 469 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 LRRC26Q2I0M4 334 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 HKDC1Q2TB90 917 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 EIF2S3LQ2VIR3 472 aaKnown RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 AP5B1Q2VPB7 878 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 CASC4Q6P4E1 433 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 SLC9B2Q86UD5 537 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 PGAM4Q8N0Y7 254 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 PARP16Q8N5Y8 322 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 IL17RCQ8NAC3 791 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 NSUN6Q8TEA1 469 aaKnown RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 USP13Q92995 863 aaPredicted RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 USP7Q93009 1102 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 DEFB118Q96PH6 123 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 NEDD4LQ96PU5 975 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 THAP2Q9H0W7 228 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 SYNDIG1Q9H7V2 258 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 RGS18Q9NS28 235 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 CATSPERZQ9NTU4 200 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 EXD2Q9NVH0 621 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 GPN3Q9UHW5 284 aaPredicted RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 NDUFAF1Q9Y375 327 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 PCDHGB1Q9Y5G3 927 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 FKBP7Q9Y680 259 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 PP2D1A8MPX8 630 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 CACNB4O00305 520 aaPredicted RBP8.52□□□□□ -1.05
SSB-205ENST00000422006 WWP2O00308 870 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 INPPL1O15357 1258 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 HRO43593 1189 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 DCXO43602 365 aa8.52□□□□□ -1.05
SSB-205ENST00000422006 CHMP2AO43633 222 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms