RNA–Protein interactions for RNA: ENST00000421852.5

TMEM41A-203, Transcript of transmembrane protein 41A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM41A, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-203ENST00000421852 SPESP1Q6UW49 350 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 SUSD1Q6UWL2 747 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 TMEM179BQ7Z7N9 219 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 DPP10Q8N608 796 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 SLC13A3Q8WWT9 602 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 FBXL8Q96CD0 374 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 CLPBQ9H078 707 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 PCDHGA8Q9Y5G5 932 aa13.46□□□□□ -0.25
TMEM41A-203ENST00000421852 TYW5A2RUC4 315 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 TBKBP1A7MCY6 615 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 UPK3BL1B0FP48 263 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 UPK3BL2E5RIL1 263 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GAPDHSO14556 408 aaPredicted RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 TBC1D4O60343 1298 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 DEAF1O75398 565 aaPredicted RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CST1P01037 141 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 RPLP2P05387 115 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GALTP07902 379 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 THRBP10828 461 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 ALDH3A2P51648 485 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 SFSWAPQ12872 951 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 KIAA0040Q15053 153 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 FAM98BQ52LJ0 330 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 LDLRAP1Q5SW96 308 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 ADGRF1Q5T601 910 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 SULT1C3Q6IMI6 304 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 FRS2Q8WU20 508 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 SLC22A17Q8WUG5 538 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GTF2H4Q92759 462 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GFM2Q969S9 779 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 NCLNQ969V3 563 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 MUC13Q9H3R2 512 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 WWOXQ9NZC7 414 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 INVSQ9Y283 1065 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 VPS9D1Q9Y2B5 631 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CCL27Q9Y4X3 112 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 C1orf232A0A0U1RR37 186 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 LOC730098B7Z3J9 87 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GNGT2O14610 69 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 AXIN1O15169 862 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 PFDN6O15212 129 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 S100BP04271 92 aaPredicted RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 RAP2AP10114 183 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 HLCSP50747 726 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CLCN4P51793 760 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 NEK2P51955 445 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CACNG1Q06432 222 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GPNMBQ14956 572 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 PCBP2Q15366 365 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CPSF6Q16630 551 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 MAPKAPK3Q16644 382 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 ARMC12Q5T9G4 340 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 RBM23Q86U06 439 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 TBC1D15Q8TC07 691 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 FNDC8Q8TC99 324 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 SNX19Q92543 992 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 DGCR6LQ9BY27 220 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 AMBRA1Q9C0C7 1298 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 LHPPQ9H008 270 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 TNKS2Q9H2K2 1166 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 LATS2Q9NRM7 1088 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 VPS51Q9UID3 782 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 ZNF490Q9ULM2 529 aaPredicted RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 G3V2T6 193 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 OTCP00480 354 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 SLC10A3P09131 477 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 HMGA1P17096 107 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 DCKP27707 260 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CSKP41240 450 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 TPD52P55327 224 aaPredicted RBP13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CYP4F3Q08477 520 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 ARHGEF7Q14155 803 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 CRY1Q16526 586 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 GALNT10Q86SR1 603 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 ZDHHC13Q8IUH4 622 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 RGL4Q8IZJ4 473 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 APCDD1Q8J025 514 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 PARP8Q8N3A8 854 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 RNF175Q8N4F7 328 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 PDPRQ8NCN5 879 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 FAM162AQ96A26 154 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 HPS4Q9NQG7 708 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 PFDN4Q9NQP4 134 aa13.45□□□□□ -0.26
TMEM41A-203ENST00000421852 FRMPD3Q5JV73 1810 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 PTGES3LE9PB15 166 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 AREL1O15033 823 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 RAD51BO15315 384 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 LRATO95237 230 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 MYCLP1P12525 358 aaPredicted RBP13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 MAP4P27816 1152 aaKnown RBP13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 PHC1P78364 1004 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 ZXDBP98169 803 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 FXNQ16595 210 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 CTU2Q2VPK5 515 aaKnown RBP13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 LRRC73Q5JTD7 316 aa13.44□□□□□ -0.26
TMEM41A-203ENST00000421852 RNF180Q86T96 592 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms