RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 OR52E1Q8NGJ3 308 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 CT55Q8WUE5 264 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 STAMBPL1Q96FJ0 436 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 FCRL4Q96PJ5 515 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 RANBP9Q96S59 729 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 FRMD8P1Q9BZ68 369 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 TSGA10Q9BZW7 698 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 PDE7BQ9NP56 450 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 LHX9Q9NQ69 397 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 CASS4Q9NQ75 786 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 PLSCR2Q9NRY7 297 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 FGF21Q9NSA1 209 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 TUBD1Q9UJT1 453 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 RARRES3Q9UL19 164 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 RIMKLBQ9ULI2 386 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 PCDHGA6Q9Y5G7 932 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 COLEC10Q9Y6Z7 277 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 TNRC6AQ8NDV7 1962 aaKnown RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 UBA6A0AVT1 1052 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-206ENST00000420121 SLC5A10A0PJK1 596 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ARHGAP6O43182 974 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 KRT86O43790 486 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 AP2A2O94973 939 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ZBTB11O95625 1053 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-206ENST00000420121 IFNB1P01574 187 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 NTRK1P04629 796 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ZSCAN5DPP0CG00 497 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 SFTPCP11686 197 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TCN2P20062 427 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ACADLP28330 430 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 RPL22P35268 128 aaKnown RBP10.72□□□□□ -0.69
SSBP3-206ENST00000420121 NSG1P42857 185 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 CCR10P46092 362 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TUBB4BP68371 445 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 HSD11B2P80365 405 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ACY1Q03154 408 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ABRQ12979 859 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 SNX1Q13596 522 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 DNASE1L3Q13609 305 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TUBB2AQ13885 445 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 SKIDA1Q1XH10 827 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 DEFB109BQ30KR1 87 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF789Q5FWF6 425 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TSTD2Q5T7W7 516 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 PRAMEF17Q5VTA0 474 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 C16orf46Q6P387 395 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 FAM199XQ6PEV8 388 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-206ENST00000420121 NAPRTQ6XQN6 538 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TMEM135Q86UB9 458 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 BPHLQ86WA6 291 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ADGRF3Q8IZF5 1079 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 FLVCR1-AS1Q8TAF5 88 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 UBE2Q2Q8WVN8 375 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 HDAC10Q969S8 669 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 LRRC45Q96CN5 670 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 FERD3LQ96RJ6 166 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TUBB2BQ9BVA1 445 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TLR10Q9BXR5 811 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 PITPNM3Q9BZ71 974 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 TFB2MQ9H5Q4 396 aaKnown RBP10.72□□□□□ -0.69
SSBP3-206ENST00000420121 MVB12BQ9H7P6 319 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 C1GALT1Q9NS00 363 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 SMARCAL1Q9NZC9 954 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 PADI1Q9ULC6 663 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 ICKQ9UPZ9 632 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 HEBP2Q9Y5Z4 205 aa10.72□□□□□ -0.69
SSBP3-206ENST00000420121 NBASA2RRP1 2371 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 HEATR9A2RTY3 570 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 SLC9B1P1A6NJY1 282 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 BHMG1C9JSJ3 638 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 LIN7AO14910 233 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 OR1I1O60431 355 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 GOT2P00505 430 aaKnown RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 GSTM1P09488 218 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 MSL3P1P0C860 447 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 ST6GAL1P15907 406 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 ADRA1DP25100 572 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 PRDX3P30048 256 aaKnown RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 GSDMDP57764 484 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 CCZ1BP86790 482 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 MC1RQ01726 317 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 GSTM4Q03013 218 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 GPS2Q13227 327 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 PRKG2Q13237 762 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 RPS6KA1Q15418 735 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 CCNG2Q16589 344 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 KCTD19Q17RG1 926 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 DRICH1Q6PGQ1 229 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 PRICKLE2Q7Z3G6 844 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 DNAAF3Q8N9W5 541 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 OR5AR1Q8NGP9 310 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 LKAAEAR1Q8TD35 194 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 LCN9Q8WX39 176 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 TFGQ92734 400 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-206ENST00000420121 SGSM3Q96HU1 749 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 HGH1Q9BTY7 390 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 TRIM4Q9C037 500 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 FAM117AQ9C073 453 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 SRMSQ9H3Y6 488 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms