RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 TRIB3Q96RU7 358 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 CSF3RQ99062 836 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 KIFC1Q9BW19 673 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 CHRAC1Q9NRG0 131 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 TMEM181Q9P2C4 612 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 COLQQ9Y215 455 aaPredicted RBP13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 HS3ST2Q9Y278 367 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 COL4A3Q01955 1670 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 KMOO15229 486 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 NFATC1O95644 943 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 NR4A1P22736 598 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 POLR2IP36954 125 aaKnown RBP13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 GMPRP36959 345 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 FCHO2Q0JRZ9 810 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 POU6F1Q14863 301 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 PGS1Q32NB8 556 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 ARL13AQ5H913 290 aaPredicted RBP13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 SIRPB2Q5JXA9 342 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 SPANXN3Q5MJ09 141 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 ATAD3BQ5T9A4 648 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 SLX4IPQ5VYV7 408 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 LIPMQ5VYY2 423 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 REP15Q6BDI9 236 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 FAM45BPQ6NSW5 357 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 CES3Q6UWW8 571 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 USP51Q70EK9 711 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 OFCC1Q8IZS5 231 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 DCLK2Q8N568 766 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 BPIFB6Q8NFQ5 453 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 FAM45AQ8TCE6 357 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 CAPSLQ8WWF8 208 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 CENPNQ96H22 339 aaPredicted RBP13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 TRIM15Q9C019 465 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 POMKQ9H5K3 350 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 NMRAL1Q9HBL8 299 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 CPNE5Q9HCH3 593 aa13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 SMPD3Q9NY59 655 aaPredicted RBP13.09□□□□□ -0.31
SFTPA1-202ENST00000419470 ZCWPW2A0A1B0GU75 182 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 AQP12BA6NM10 295 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 AREL1O15033 823 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 DEAF1O75398 565 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 CLIC3O95833 236 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 NTRK1P04629 796 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 CHRNB1P11230 501 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 LAMP2P13473 410 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 HLA-DPA1P20036 260 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 FASP25445 335 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 MTHFRP42898 656 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 STK19P49842 368 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 IFITM3Q01628 133 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 DNASE1L3Q13609 305 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 CYBRD1Q53TN4 286 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 PCID2Q5JVF3 399 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 TMEM215Q68D42 235 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 NCEH1Q6PIU2 408 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 USP43Q70EL4 1123 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 MFSD6LQ8IWD5 586 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 AQP12AQ8IXF9 295 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 SMRP1Q8NCR6 262 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 MAELQ96JY0 434 aaKnown RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 LHPPQ9H008 270 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 ATP13A3Q9H7F0 1226 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 ZDHHC2Q9UIJ5 367 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 A0A096LPK6 155 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 TRPC5OSA6NMA1 111 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 A8MU76 341 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 GUCY1B2O75343 617 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 CISD3P0C7P0 127 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 SRCP12931 536 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 IL10P22301 178 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 SERPINB1P30740 379 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 SPRP35270 261 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 GRIA4P48058 902 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 CDC20Q12834 499 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 FRG1Q14331 258 aaKnown RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 INPP5AQ14642 412 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 SPCS2Q15005 226 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 GAB4Q2WGN9 574 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 DGKKQ5KSL6 1271 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 ATXN7L2Q5T6C5 722 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 UGT3A1Q6NUS8 523 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 ZYG11AQ6WRX3 759 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 HACD2Q6Y1H2 254 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 KIAA0408Q6ZU52 694 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 CHST15Q7LFX5 561 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 DSG4Q86SJ6 1040 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 C11orf74Q86VG3 221 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 C12orf40Q86WS4 652 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 HEATR4Q86WZ0 1026 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 ETFBKMTQ8IXQ9 262 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 PELI3Q8N2H9 469 aa13.08□□□□□ -0.32
SFTPA1-202ENST00000419470 ZNF669Q96BR6 464 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms