RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 VPS51Q9UID3 782 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 K7EPI3 171 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 OR7A17O14581 309 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 VNN2O95498 520 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PGRP06401 933 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ANXA5P08758 320 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CSKP41240 450 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 STT3AP46977 705 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HLCSP50747 726 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MAPK10P53779 464 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IL1RL1Q01638 556 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SP3Q02447 781 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NFATC2Q13469 925 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SELPLGQ14242 412 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CXorf57Q6NSI4 855 aaKnown RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C16orf87Q6PH81 154 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNF783Q6ZMS7 281 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMEM26Q6ZUK4 368 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ADHFE1Q8IWW8 467 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CLHC1Q8NHS4 586 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CEP295NLQ96MC4 621 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMEM175Q9BSA9 504 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BOCQ9BWV1 1114 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CWH43Q9H720 699 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 VAPAQ9P0L0 249 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DNAJB9Q9UBS3 223 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LSM7Q9UK45 103 aaKnown RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TRPM7Q96QT4 1865 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 A0A1W2PQ45 241 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 A0A1W2PQY0 241 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C2orf78A6NCI8 922 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 STK16O75716 305 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PGLSO95336 258 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HNRNPCP07910 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GGT1P19440 569 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SPANXN4Q5MJ08 99 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PDPRQ8NCN5 879 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CD244Q9BZW8 370 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RNF38Q9H0F5 515 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 P2RY12Q9H244 342 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RMND5AQ9H871 391 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RNF186Q9NXI6 227 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 OARD1Q9Y530 152 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HS6ST1O60243 411 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 F11P03951 625 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 S100A3P33764 101 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GGT5P36269 586 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MAPK8P45983 427 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ARHGDIAP52565 204 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 FAM9CQ8IZT9 166 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BPIFB1Q8TDL5 484 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SELENOMQ8WWX9 145 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ATP13A3Q9H7F0 1226 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C3orf18Q9UK00 162 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RSL1D1O76021 490 aaKnown RBP11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CLDN7O95471 211 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GLUD1P00367 558 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CCNA2P20248 432 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ELK4P28324 431 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ENTPD1P49961 510 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TRAF3Q13114 568 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SLC8B1Q6J4K2 584 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MAGED4Q96JG8 741 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 FANCEQ9HB96 536 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IRAK4Q9NWZ3 460 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C1orf109Q9NX04 203 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HSFX1Q9UBD0 423 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PCDHGA11Q9Y5H2 935 aa11.48□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PATJQ8NI35 1801 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 A0A0J9YVX5 310 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 A0A1W2PPW3 197 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 K7ERQ8 282 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CXCR6O00574 342 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SCELO95171 688 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PRAMEF12O95522 483 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZFP36L2P47974 494 aaKnown RBP11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RAD23AP54725 363 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PGS1Q32NB8 556 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNF773Q6PK81 442 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMEM132CQ8N3T6 1108 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NUDT8Q8WV74 236 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RBM4BQ9BQ04 359 aaKnown RBP11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RBM4Q9BWF3 364 aaKnown RBP11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MTRRQ9UBK8 725 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LHX3Q9UBR4 397 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LOC730098B7Z3J9 87 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ARVCFO00192 962 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RECQL5O94762 991 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CLDN9O95484 217 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IGSF6O95976 241 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BCL10O95999 233 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SERPINA4P29622 427 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SPAM1P38567 509 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PHEXP78562 749 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PHKG1Q16816 387 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GRAMD4Q6IC98 578 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms